RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CDH24Q86UP0 819 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 PPFIBP1Q86W92 1011 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 CCDC144CPQ8IYA2 1237 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 SH3TC2Q8TF17 1288 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 KCNF1Q9H3M0 494 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 TMX1Q9H3N1 280 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 KDM2BQ8NHM5 1336 aa6.42□□□□□ -1.38
CDC42BPA-211ENST00000466538 CCDC163A0A0D9SF12 145 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 C9IYK1 514 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 DYNC1LI2O43237 492 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 TP53P04637 393 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 AUHQ13825 339 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 PLEKHG4Q58EX7 1191 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 AXDND1Q5T1B0 1012 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 HEATR6Q6AI08 1181 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 SPATC1Q76KD6 591 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 HOMER1Q86YM7 354 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 APPBP2Q92624 585 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 DCAF5Q96JK2 942 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 HAUS7Q99871 368 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 SPATA9Q9BWV2 254 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 GBP3Q9H0R5 595 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 LGR6Q9HBX8 967 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 TMEM260Q9NX78 707 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
CDC42BPA-211ENST00000466538 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 PPM1BO75688 479 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 EOMESO95936 686 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 NBPF9Q3BBW0 867 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 SLC10A6Q3KNW5 377 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 OGFOD3Q6PK18 319 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 SYNPOQ8N3V7 929 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 ZBTB38Q8NAP3 1195 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 KLHL25Q9H0H3 589 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 WHRNQ9P202 907 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 STOML1Q9UBI4 398 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 STK17AQ9UEE5 414 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 SUSD2Q9UGT4 822 aa6.4□□□□□ -1.38
CDC42BPA-211ENST00000466538 SBNO2Q9Y2G9 1366 aa6.4□□□□□ -1.39
CDC42BPA-211ENST00000466538 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CBFA2T2O43439 604 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 EPHX1P07099 455 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CD247P20963 164 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 KIR3DL1P43629 444 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CHRNA4P43681 627 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 GATA4P43694 442 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CDK5R2Q13319 367 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 SV2CQ496J9 727 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 CYP27C1Q4G0S4 372 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 TOP6BLQ8N6T0 577 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZSWIM2Q8NEG5 633 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 RCC1LQ96I51 464 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 SLC26A8Q96RN1 970 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 KCNH3Q9ULD8 1083 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 TPX2Q9ULW0 747 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 RAXQ9Y2V3 346 aa6.39□□□□□ -1.39
CDC42BPA-211ENST00000466538 DIAPH1O60610 1272 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 CDC45O75419 566 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 KCNMA1Q12791 1236 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 SFRP5Q5T4F7 317 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 TDRD10Q5VZ19 366 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 FAM214BQ7L5A3 538 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 ADAT2Q7Z6V5 191 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZAR1Q86SH2 424 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF512BQ96KM6 892 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 GP6Q9HCN6 339 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 PRDM5Q9NQX1 630 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 DIS3Q9Y2L1 958 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF451Q9Y4E5 1061 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 PCDHB12Q9Y5F1 795 aa6.38□□□□□ -1.39
CDC42BPA-211ENST00000466538 NOP56O00567 594 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 FAM87AP0C7U9 286 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 ITGA4P13612 1032 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 SQSTM1Q13501 440 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 HSP90AA2PQ14568 343 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 TAF7LQ5H9L4 462 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 POMZP3Q6PJE2 187 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 C22orf34Q6ZV56 151 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 C16orf86Q6ZW13 317 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 ARHGEF39Q8N4T4 335 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 CRACR2BQ8N4Y2 399 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 BVESQ8NE79 360 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 GATA6Q92908 595 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms