RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GREB1LQ9C091 1923 aaPredicted RBP11.67□□□□□ -0.54
PMF1-204ENST00000466489 PRDM1O75626 825 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 AKR1B1P15121 316 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 RASA1P20936 1047 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 PSMA5P28066 241 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 TM4SF4P48230 202 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 BACE1P56817 501 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 SEPT2Q15019 361 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 CCDC178Q5BJE1 867 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 MCTP1Q6DN14 999 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 LRSAM1Q6UWE0 723 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 GADL1Q6ZQY3 521 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 IQCA1Q86XH1 822 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 PROCA1Q8NCQ7 364 aaPredicted RBP11.67□□□□□ -0.54
PMF1-204ENST00000466489 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
PMF1-204ENST00000466489 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
PMF1-204ENST00000466489 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 GJA5P36382 358 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 TFAP4Q01664 338 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 PTH1RQ03431 593 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 EVX2Q03828 476 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 MTMR2Q13614 643 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 IL25Q9H293 177 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 LMBRD1Q9NUN5 540 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 SAGE1Q9NXZ1 904 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
PMF1-204ENST00000466489 LIMCH1Q9UPQ0 1083 aa11.66□□□□□ -0.54
PMF1-204ENST00000466489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
PMF1-204ENST00000466489 ERICH2A1L162 156 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 ZNF500O60304 480 aaPredicted RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 BRD1O95696 1058 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 TTLL1O95922 423 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 FGRP09769 529 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 HSPA4P34932 840 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 HMGCS2P54868 508 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 HMGN5P82970 282 aaKnown RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 KRT32Q14532 448 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 ANKRD23Q86SG2 305 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 TBC1D10CQ8IV04 446 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 TMEM87AQ8NBN3 555 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 NCOA7Q8NI08 942 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 LPAR1Q92633 364 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 NAP1L5Q96NT1 182 aaPredicted RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 UBAC1Q9BSL1 405 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 KIAA1683Q9H0B3 1180 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.65□□□□□ -0.54
PMF1-204ENST00000466489 SYNPO2Q9UMS6 1093 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
PMF1-204ENST00000466489 RAD21O60216 631 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 PRPF40AO75400 957 aaKnown RBP11.64□□□□□ -0.55
PMF1-204ENST00000466489 OFD1O75665 1012 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 CYP21A2P08686 494 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 OSBPP22059 807 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
PMF1-204ENST00000466489 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
PMF1-204ENST00000466489 SH3D19Q5HYK7 790 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 FAM47AQ5JRC9 791 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 CCDC84Q86UT8 332 aaPredicted RBP11.64□□□□□ -0.55
PMF1-204ENST00000466489 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 CEP95Q96GE4 821 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
PMF1-204ENST00000466489 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 SMIM22K7EJ46 135 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 KDM4AO75164 1064 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
PMF1-204ENST00000466489 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
PMF1-204ENST00000466489 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
PMF1-204ENST00000466489 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 SMCR8Q8TEV9 937 aaPredicted RBP11.63□□□□□ -0.55
PMF1-204ENST00000466489 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 ALDH8A1Q9H2A2 487 aaPredicted RBP11.63□□□□□ -0.55
PMF1-204ENST00000466489 TCP11L1Q9NUJ3 509 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 TMX2Q9Y320 296 aa11.63□□□□□ -0.55
PMF1-204ENST00000466489 NEDD4P46934 1319 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 B4E1Z4 1266 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms