RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 A0A0G2JLW4 131 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 GNB5O14775 395 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 SSBP05455 408 aaKnown RBP eCLIP4.34□□□□□ -1.71
SORT1-202ENST00000466471 NEFMP07197 916 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 DPEP1P16444 411 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 LMNB1P20700 586 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 FAM50AQ14320 339 aaKnown RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 BMS1Q14692 1282 aaKnown RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 C8orf34Q49A92 452 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 ARSHQ5FYA8 562 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 TBCELQ5QJ74 424 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 KIAA0825Q8IV33 1275 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 GPR152Q8TDT2 470 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 FAM122AQ96E09 287 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 GPR101Q96P66 508 aaPredicted RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 MPHOSPH9Q99550 1183 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 OSBPL7Q9BZF2 842 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 CRISPLD1Q9H336 500 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 GGNBP2Q9H3C7 697 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 ZFYVE28Q9HCC9 887 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 CCNL1Q9UK58 526 aaPredicted RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 TRAK1Q9UPV9 953 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 PCDHGC4Q9Y5F7 938 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 SYNGAP1Q96PV0 1343 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 POLR3AO14802 1390 aaPredicted RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 ANKRD36BQ8N2N9 1353 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 PIK3C2GO75747 1445 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 MAP2P11137 1827 aaKnown RBP4.34□□□□□ -1.71
SORT1-202ENST00000466471 AKAP11Q9UKA4 1901 aa4.34□□□□□ -1.71
SORT1-202ENST00000466471 MUC6Q6W4X9 2439 aa4.34□□□□□ -1.72
SORT1-202ENST00000466471 CENPJQ9HC77 1338 aaPredicted RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 U2SURPO15042 1029 aaKnown RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 MARCH6O60337 910 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 RAB11FIP3O75154 756 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 MICAL2O94851 1124 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 USP17L7P0C7H9 530 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 ARAFP10398 606 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 CHRNA4P43681 627 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 SOX9P48436 509 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 DGKGP49619 791 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 ARSDP51689 593 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 RAB33AQ14088 237 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 NOL8Q76FK4 1167 aaKnown RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 AMIGO3Q86WK7 504 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 GALNT12Q8IXK2 581 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 GPATCH3Q96I76 525 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 SPON2Q9BUD6 331 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 NT5C1AQ9BXI3 368 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 SLKQ9H2G2 1235 aaPredicted RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 KLK14Q9P0G3 267 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 KLF15Q9UIH9 416 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 ISY1Q9ULR0 285 aaKnown RBP4.33□□□□□ -1.72
SORT1-202ENST00000466471 USP3Q9Y6I4 520 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 CHD8Q9HCK8 2581 aa4.33□□□□□ -1.72
SORT1-202ENST00000466471 CACNA1BQ00975 2339 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 DCDC2BA2VCK2 349 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 PIK3R2O00459 728 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 ATXN7O15265 892 aaPredicted RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 EGFRP00533 1210 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 GCP02774 474 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 EPB42P16452 691 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 CD33P20138 364 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 ATP4AP20648 1035 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 IRX6P78412 446 aaPredicted RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 DOC2BQ14184 412 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 NBPF1Q3BBV0 1214 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 TNNI3KQ59H18 835 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 ARSJQ5FYB0 599 aaPredicted RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 MEI1Q5TIA1 1274 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 CYP4F22Q6NT55 531 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 PRPF40BQ6NWY9 871 aaKnown RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 FIGNL1Q6PIW4 674 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 CHSY3Q70JA7 882 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 ZNF438Q7Z4V0 828 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 RELL1Q8IUW5 271 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 TRIM55Q9BYV6 548 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 CCDC113Q9H0I3 377 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 SEMA6BQ9H3T3 888 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 ZNF408Q9H9D4 720 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 SPC25Q9HBM1 224 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 STK26Q9P289 416 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 DMGDHQ9UI17 866 aaKnown RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 HCN2Q9UL51 889 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 HCN4Q9Y3Q4 1203 aa4.32□□□□□ -1.72
SORT1-202ENST00000466471 MRPL42Q9Y6G3 142 aaKnown RBP4.32□□□□□ -1.72
SORT1-202ENST00000466471 MYBBP1AQ9BQG0 1328 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 A0A1W2PNR3 127 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 FSD2A1L4K1 749 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 PPP1R12AO14974 1030 aaPredicted RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 KHNYNO15037 678 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 KLF4O43474 513 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 RRP9O43818 475 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 DNAJC6O75061 913 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 AOC2O75106 756 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 PHACTR2O75167 634 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 MMP10P09238 476 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms