RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
VPS16-206ENST00000466415 STK36Q9NRP7 1315 aa14.11□□□□□ -0.15
VPS16-206ENST00000466415 H3BQV1 296 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 STX6O43752 255 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 PPFIA3O75145 1194 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 FMNL1O95466 1100 aaPredicted RBP14.1□□□□□ -0.15
VPS16-206ENST00000466415 FOSBP53539 338 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 RRP1BQ14684 758 aaKnown RBP14.1□□□□□ -0.15
VPS16-206ENST00000466415 CCDC96Q2M329 555 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 IFFO2Q5TF58 517 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 PHKBQ93100 1093 aa14.1□□□□□ -0.15
VPS16-206ENST00000466415 FAM217BQ9NTX9 383 aaPredicted RBP14.1□□□□□ -0.15
VPS16-206ENST00000466415 PLEKHA8P1O95397 391 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 SYT1P21579 422 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 GUCY1A2P33402 732 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 WRNIP1Q96S55 665 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
VPS16-206ENST00000466415 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 PPP1R12BO60237 982 aaPredicted RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 DEXIO95424 95 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 PDHBP11177 359 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 VEGFAP15692 232 aaPredicted RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 TRIM29Q14134 588 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 NTRK3Q16288 839 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 CMTR1Q8N1G2 835 aaKnown RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 DCAF4Q8WV16 495 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 MKL1Q969V6 931 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 C8orf76Q96K31 380 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 FEZ1Q99689 392 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 ALG1Q9BT22 464 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 RNF26Q9BY78 433 aaPredicted RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 RRAGCQ9HB90 399 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 GOPCQ9HD26 462 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 PICK1Q9NRD5 415 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 RBM27Q9P2N5 1060 aaKnown RBP14.08□□□□□ -0.16
VPS16-206ENST00000466415 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 CNTNAP5Q8WYK1 1306 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 SSC5DA1L4H1 1573 aa14.08□□□□□ -0.16
VPS16-206ENST00000466415 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 POTECB2RU33 542 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 BRD1O95696 1058 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 JAG1P78504 1218 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 PKP1Q13835 747 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 PRKG1Q13976 671 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 GPATCH4Q5T3I0 446 aaKnown RBP14.07□□□□□ -0.16
VPS16-206ENST00000466415 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
VPS16-206ENST00000466415 SLFN13Q68D06 897 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
VPS16-206ENST00000466415 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
VPS16-206ENST00000466415 CDCA5Q96FF9 252 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 FRMPD2Q68DX3 1309 aaPredicted RBP14.07□□□□□ -0.16
VPS16-206ENST00000466415 MYH4Q9Y623 1939 aa14.07□□□□□ -0.16
VPS16-206ENST00000466415 ATAD5Q96QE3 1844 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 DOCK1Q14185 1865 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 PALM3A6NDB9 673 aaPredicted RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 KLRF2D3W0D1 207 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 PRPF3O43395 683 aaKnown RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 GOLGA8HP0CJ92 632 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 ZSCAN22P10073 491 aaPredicted RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 XBP1P17861 261 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 INPP5BP32019 993 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 SLC1A4P43007 532 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 TTLL12Q14166 644 aaPredicted RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 STAG2Q8N3U4 1231 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 SRBD1Q8N5C6 995 aaKnown RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
VPS16-206ENST00000466415 ZNF112Q9UJU3 913 aa14.06□□□□□ -0.16
VPS16-206ENST00000466415 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 NBPF11Q86T75 865 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 LDHDQ86WU2 507 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
VPS16-206ENST00000466415 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 GBP4Q96PP9 640 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 GPCPD1Q9NPB8 672 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.05□□□□□ -0.16
VPS16-206ENST00000466415 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
VPS16-206ENST00000466415 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 TMX2Q9Y320 296 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 CSADQ9Y600 493 aa14.05□□□□□ -0.16
VPS16-206ENST00000466415 F5H6K3 240 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 NDUFB10O96000 172 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 F13A1P00488 732 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 ECE1P42892 770 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 GUCY1B3Q02153 619 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 KLRC3Q07444 240 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms