RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 LIN7BQ9HAP6 207 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 CYP4F12Q9HCS2 524 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 NLRP2Q9NX02 1062 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 MEGF6O75095 1541 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 CCDC7Q96M83 1385 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 TRIM37O94972 964 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 SPINK2P20155 84 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 AMPHP49418 695 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 CLEC4MQ9H2X3 399 aaPredicted RBP6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 POLKQ9UBT6 870 aa6.59□□□□□ -1.35
EXOSC3-204ENST00000465860 TNS2Q63HR2 1409 aa6.59□□□□□ -1.36
EXOSC3-204ENST00000465860 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 RTL1A6NKG5 1358 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 CGNL1Q0VF96 1302 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 BTAF1O14981 1849 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 WDR64B1ANS9 1081 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 KCNQ2O43526 872 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 ADAMTS4O75173 837 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 CTSBP07858 339 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 GRIK1P39086 918 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 PDE3BQ13370 1112 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 ORC1Q13415 861 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 EZH2Q15910 746 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 DDB1Q16531 1140 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 INTS5Q6P9B9 1019 aaKnown RBP6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 MFSD14AQ96MC6 490 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 FAM129BQ96TA1 746 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 ARID3AQ99856 593 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 DOT1LQ8TEK3 1739 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 TOGARAM1Q9Y4F4 1720 aa6.58□□□□□ -1.36
EXOSC3-204ENST00000465860 INSRP06213 1382 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 FLT4P35916 1363 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 PKD1L3Q7Z443 1732 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 PPM1GO15355 546 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 NDUFB5O43674 189 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 C2CD4AQ8NCU7 369 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 OVOS2A0A0G2JMS6 1433 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 ITGB4P16144 1822 aa6.57□□□□□ -1.36
EXOSC3-204ENST00000465860 EXOC5O00471 708 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 IGHA2P01877 340 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 F13BP05160 661 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 IL2RBP14784 551 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 MAOBP27338 520 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 HOXA10P31260 410 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 SOX4Q06945 474 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 CNGB1Q14028 1251 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 SHISA5Q8N114 240 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 ACSBG1Q96GR2 724 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 OAS3Q9Y6K5 1087 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 NCAPD2Q15021 1401 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 SMG6Q86US8 1419 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 RGPD3A6NKT7 1758 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 RGPD4Q7Z3J3 1758 aa6.56□□□□□ -1.36
EXOSC3-204ENST00000465860 VIRMAQ69YN4 1812 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 EIF4EBP3O60516 100 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 CPNE3O75131 537 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 ECEL1O95672 775 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 NEFLP07196 543 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 USP11P51784 963 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 GP2P55259 537 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 EIF4A2Q14240 407 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 NFKBIBQ15653 356 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 CC2D1BQ5T0F9 858 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 FBXL6Q8N531 539 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 TRIM56Q9BRZ2 755 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 EHD4Q9H223 541 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 ZNF576Q9H609 170 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 KNSTRNQ9Y448 316 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 BCL9O00512 1426 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 KIF24Q5T7B8 1368 aa6.55□□□□□ -1.36
EXOSC3-204ENST00000465860 GPR182O15218 404 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 B3GALT4O96024 378 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 ADH5P11766 374 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 ITPKAP23677 461 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 POU4F3Q15319 338 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 ERICH6Q7L0X2 663 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 MORC1Q86VD1 984 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 DDX54Q8TDD1 881 aaKnown RBP6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 CITED4Q96RK1 184 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 TUBGCP6Q96RT7 1819 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 NSD2O96028 1365 aa6.54□□□□□ -1.36
EXOSC3-204ENST00000465860 LY75O60449 1722 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 CYP27B1O15528 508 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms