RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 ERCC3P19447 782 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 GABPAQ06546 454 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 TRIM60Q495X7 471 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 FAM109BQ6ICB4 259 aaPredicted RBP12.55□□□□□ -0.4
GPNMB-206ENST00000465673 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
GPNMB-206ENST00000465673 SLC39A5Q6ZMH5 540 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 SH3RF1Q7Z6J0 888 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 BADQ92934 168 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 FERMT2Q96AC1 680 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 CDX2Q99626 313 aaPredicted RBP12.55□□□□□ -0.4
GPNMB-206ENST00000465673 TANGO6Q9C0B7 1094 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 MSCO60682 206 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 COG2Q14746 738 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 AACSQ86V21 672 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 SIAH1Q8IUQ4 282 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 SPATC1LQ9H0A9 340 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
GPNMB-206ENST00000465673 TRIM43BA6NCK2 446 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 PLS1Q14651 629 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 ARRDC4Q8NCT1 418 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 TRIM43Q96BQ3 446 aaPredicted RBP12.53□□□□□ -0.4
GPNMB-206ENST00000465673 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
GPNMB-206ENST00000465673 VCANP13611 3396 aa12.52□□□□□ -0.4
GPNMB-206ENST00000465673 EYSQ5T1H1 3165 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 SEPT4O43236 478 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 IGSF3O75054 1194 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 PDE6AP16499 860 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 ITGB8P26012 769 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 LRRC41Q15345 812 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 CEP85Q6P2H3 762 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 TTYH1Q9H313 450 aaPredicted RBP12.52□□□□□ -0.41
GPNMB-206ENST00000465673 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 RLFQ13129 1914 aa12.52□□□□□ -0.41
GPNMB-206ENST00000465673 CYP2D7A0A087X1C5 515 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 KBTBD13C9JR72 458 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 APBB1O00213 710 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 PRKAB2O43741 272 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 STRNO43815 780 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 FLOT1O75955 427 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 CHGBP05060 677 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 AKR1B1P15121 316 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 DSG3P32926 999 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 EPHB4P54760 987 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 TLE2Q04725 743 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
GPNMB-206ENST00000465673 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
GPNMB-206ENST00000465673 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
GPNMB-206ENST00000465673 ZNF532Q9HCE3 1301 aa12.51□□□□□ -0.41
GPNMB-206ENST00000465673 TCRBV5S4A2TA0A5A2 114 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 GOLIM4O00461 696 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 PGK2P07205 417 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 TAL1P17542 331 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-206ENST00000465673 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 SNX17Q15036 470 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-206ENST00000465673 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
GPNMB-206ENST00000465673 DNAJC2Q99543 621 aaKnown RBP12.5□□□□□ -0.41
GPNMB-206ENST00000465673 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
GPNMB-206ENST00000465673 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 CCER2I3L3R5 266 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 PGK1P00558 417 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 TMEM179Q6ZVK1 233 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 PANK1Q8TE04 598 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 MROH8Q9H579 483 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
GPNMB-206ENST00000465673 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 FCER1AP12319 257 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 ICA1Q05084 483 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 VCPKMTQ9H867 229 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 XPNPEP3Q9NQH7 507 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 TMX2Q9Y320 296 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms