RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ASNSP08243 561 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 MECOMQ03112 1051 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
USP39-212ENST00000465514 AAK1Q2M2I8 961 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP39-212ENST00000465514 HERC5Q9UII4 1024 aaKnown RBP11.97□□□□□ -0.49
USP39-212ENST00000465514 PHF24Q9UPV7 400 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 BRWD1Q9NSI6 2320 aa11.97□□□□□ -0.49
USP39-212ENST00000465514 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 CCER2I3L3R5 266 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 IPO8O15397 1037 aaKnown RBP11.96□□□□□ -0.49
USP39-212ENST00000465514 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 ZNF384Q8TF68 577 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 HMG20BQ9P0W2 317 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 TNNQ9UQP3 1299 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 A0A0G2JMZ2 1700 aa11.96□□□□□ -0.49
USP39-212ENST00000465514 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
USP39-212ENST00000465514 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 GDF11O95390 407 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 GNAI2P04899 355 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 TRIM27P14373 513 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
USP39-212ENST00000465514 RAB30Q15771 203 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 PRAMEF19Q5SWL8 479 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 SPATA5Q8NB90 893 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 FRAT1Q92837 279 aaPredicted RBP11.95□□□□□ -0.5
USP39-212ENST00000465514 NKX2-4Q9H2Z4 354 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
USP39-212ENST00000465514 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 ERC2O15083 957 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 BCAR3O75815 825 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 TIMP1P01033 207 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 LDHCP07864 332 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 ADORA2AP29274 412 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 GSTO1P78417 241 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP39-212ENST00000465514 ZYXQ15942 572 aaKnown RBP11.94□□□□□ -0.5
USP39-212ENST00000465514 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 DPP9Q86TI2 863 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 NSUN4Q96CB9 384 aaKnown RBP11.94□□□□□ -0.5
USP39-212ENST00000465514 DNAJC18Q9H819 358 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 MSRAQ9UJ68 235 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 ZBTB21Q9ULJ3 1066 aa11.94□□□□□ -0.5
USP39-212ENST00000465514 USP34Q70CQ2 3546 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
USP39-212ENST00000465514 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 PPIGQ13427 754 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP39-212ENST00000465514 CCDC174Q6PII3 467 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 ANKRD33Q7Z3H0 272 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 SLC28A3Q9HAS3 691 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 PI4KBQ9UBF8 816 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 YBX2Q9Y2T7 364 aaKnown RBP11.93□□□□□ -0.5
USP39-212ENST00000465514 CFAP54Q96N23 3096 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 MYH1P12882 1939 aa11.93□□□□□ -0.5
USP39-212ENST00000465514 MYO5AQ9Y4I1 1855 aaKnown RBP11.92□□□□□ -0.5
USP39-212ENST00000465514 DCDC2CA8MYV0 355 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
USP39-212ENST00000465514 PGK1P00558 417 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 ACRP10323 421 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 CSF2RAP15509 400 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 MCAMP43121 646 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 MFSD5Q6N075 450 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 RNF180Q86T96 592 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 TEX11Q8IYF3 940 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 HERVK_113Q902F9 699 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
USP39-212ENST00000465514 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
USP39-212ENST00000465514 PARP14Q460N5 1801 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
USP39-212ENST00000465514 TLL1O43897 1013 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 COBLO75128 1261 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 UQCRFS1P1P0C7P4 283 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 RARBP10826 455 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 PSRC1Q6PGN9 363 aaPredicted RBP11.91□□□□□ -0.5
USP39-212ENST00000465514 LBX2Q6XYB7 198 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 CATSPERGQ6ZRH7 1159 aa11.91□□□□□ -0.5
USP39-212ENST00000465514 ZNF365Q70YC5 407 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms