RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 MTMR4Q9NYA4 1195 aa13.81□□□□□ -0.2
CUX1-207ENST00000465461 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
CUX1-207ENST00000465461 SLC45A1Q9Y2W3 748 aa13.81□□□□□ -0.2
CUX1-207ENST00000465461 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 B4E1Z4 1266 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 CYP21A2P08686 494 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 CTGFP29279 349 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 HOXA7P31268 230 aaPredicted RBP13.8□□□□□ -0.2
CUX1-207ENST00000465461 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
CUX1-207ENST00000465461 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 PNMA3Q9UL41 463 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
CUX1-207ENST00000465461 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
CUX1-207ENST00000465461 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
CUX1-207ENST00000465461 LAMA4Q16363 1823 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 KDM4AO75164 1064 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 TTLL1O95922 423 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 BCRP11274 1271 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
CUX1-207ENST00000465461 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
CUX1-207ENST00000465461 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 RASGRP2Q7LDG7 609 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 TXNRD2Q9NNW7 524 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 PLIN4Q96Q06 1357 aa13.79□□□□□ -0.2
CUX1-207ENST00000465461 MYH4Q9Y623 1939 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 F5H6K3 240 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 NDUFB10O96000 172 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 HERVK_113P62684 666 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 LACTBP83111 547 aaPredicted RBP13.78□□□□□ -0.2
CUX1-207ENST00000465461 KLRC3Q07444 240 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 Q3C1V9 767 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 PAGR1Q9BTK6 254 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
CUX1-207ENST00000465461 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 TRIM17Q9Y577 477 aa13.78□□□□□ -0.2
CUX1-207ENST00000465461 CYB5R4Q7L1T6 521 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 ESR2Q92731 530 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 MKL1Q969V6 931 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 ERO1AQ96HE7 468 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 MCOLN1Q9GZU1 580 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 FBXO28Q9NVF7 368 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 ZSWIM5Q9P217 1185 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 RBPJLQ9UBG7 517 aa13.77□□□□□ -0.21
CUX1-207ENST00000465461 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
CUX1-207ENST00000465461 E7EWF7 191 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 SLC27A2O14975 620 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 CNMDO75829 334 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 FLOT1O75955 427 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 PSMC4P43686 418 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
CUX1-207ENST00000465461 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 SLFN13Q68D06 897 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 OTOP1Q7RTM1 612 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 CTU1Q7Z7A3 348 aaKnown RBP13.76□□□□□ -0.21
CUX1-207ENST00000465461 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 LPAR1Q92633 364 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 TMEM47Q9BQJ4 181 aa13.76□□□□□ -0.21
CUX1-207ENST00000465461 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
CUX1-207ENST00000465461 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
CUX1-207ENST00000465461 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
CUX1-207ENST00000465461 MCCP23508 829 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 DSG3P32926 999 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 GCLCP48506 637 aaPredicted RBP13.75□□□□□ -0.21
CUX1-207ENST00000465461 COG2Q14746 738 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 ATG4CQ96DT6 458 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 KRT23Q9C075 422 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 EFCC1Q9HA90 598 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
CUX1-207ENST00000465461 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
CUX1-207ENST00000465461 NOVP48745 357 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 KIF22Q14807 665 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 FAM110CQ1W6H9 321 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 GMCL1P1Q8NEA9 526 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
CUX1-207ENST00000465461 ZSCAN10Q96SZ4 725 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms