RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 APBA2Q99767 749 aa25.13■■□□□ 1.61
CSPG5-204ENST00000465441 PUS7LQ9H0K6 701 aaKnown RBP25.13■■□□□ 1.61
CSPG5-204ENST00000465441 DCTPP1Q9H773 170 aa25.13■■□□□ 1.61
CSPG5-204ENST00000465441 SLC4A4Q9Y6R1 1079 aa25.13■■□□□ 1.61
CSPG5-204ENST00000465441 CEP290O15078 2479 aa25.12■■□□□ 1.61
CSPG5-204ENST00000465441 SLC15A5A6NIM6 579 aa25.12■■□□□ 1.61
CSPG5-204ENST00000465441 ZSCAN25Q6NSZ9 544 aa25.12■■□□□ 1.61
CSPG5-204ENST00000465441 C11orf49Q9H6J7 331 aa25.12■■□□□ 1.61
CSPG5-204ENST00000465441 ECHDC1Q9NTX5 307 aa25.12■■□□□ 1.61
CSPG5-204ENST00000465441 LHX8Q68G74 356 aa25.11■■□□□ 1.61
CSPG5-204ENST00000465441 CCDC17Q96LX7 622 aa25.11■■□□□ 1.61
CSPG5-204ENST00000465441 FLRT1Q9NZU1 646 aa25.11■■□□□ 1.61
CSPG5-204ENST00000465441 CTR9Q6PD62 1173 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 CLEC10AQ8IUN9 316 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 AMOTL1Q8IY63 956 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 NPLOC4Q8TAT6 608 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 TANGO6Q9C0B7 1094 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 ARHGEF10LQ9HCE6 1279 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 TMX2Q9Y320 296 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 IVNS1ABPQ9Y6Y0 642 aa25.1■■□□□ 1.61
CSPG5-204ENST00000465441 DSG3P32926 999 aa25.09■■□□□ 1.61
CSPG5-204ENST00000465441 GRB14Q14449 540 aa25.09■■□□□ 1.61
CSPG5-204ENST00000465441 C16orf86Q6ZW13 317 aa25.09■■□□□ 1.61
CSPG5-204ENST00000465441 DDRGK1Q96HY6 314 aa25.09■■□□□ 1.61
CSPG5-204ENST00000465441 MOV10L1Q9BXT6 1211 aaKnown RBP25.09■■□□□ 1.61
CSPG5-204ENST00000465441 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
CSPG5-204ENST00000465441 BAZ2AQ9UIF9 1905 aaKnown RBP25.09■■□□□ 1.61
CSPG5-204ENST00000465441 HOXC6P09630 235 aa25.08■■□□□ 1.61
CSPG5-204ENST00000465441 ICA1Q05084 483 aa25.08■■□□□ 1.61
CSPG5-204ENST00000465441 MFSD14CQ5VZR4 134 aa25.08■■□□□ 1.61
CSPG5-204ENST00000465441 LPAR1Q92633 364 aa25.08■■□□□ 1.61
CSPG5-204ENST00000465441 STRBPQ96SI9 672 aaKnown RBP25.08■■□□□ 1.61
CSPG5-204ENST00000465441 VCPKMTQ9H867 229 aa25.08■■□□□ 1.61
CSPG5-204ENST00000465441 ATP2B2Q01814 1243 aa25.07■■□□□ 1.6
CSPG5-204ENST00000465441 C7orf61Q8IZ16 206 aa25.07■■□□□ 1.6
CSPG5-204ENST00000465441 SPICE1Q8N0Z3 855 aa25.07■■□□□ 1.6
CSPG5-204ENST00000465441 SPATC1LQ9H0A9 340 aa25.07■■□□□ 1.6
CSPG5-204ENST00000465441 ALPK3Q96L96 1907 aa25.06■■□□□ 1.6
CSPG5-204ENST00000465441 KBTBD3Q8NAB2 608 aa25.06■■□□□ 1.6
CSPG5-204ENST00000465441 SH2D4AQ9H788 454 aa25.06■■□□□ 1.6
CSPG5-204ENST00000465441 TRIOBPQ9H2D6 2365 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 STRNO43815 780 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 FLOT1O75955 427 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 EEF2P13639 858 aaKnown RBP25.05■■□□□ 1.6
CSPG5-204ENST00000465441 ERCC3P19447 782 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 ZMYND8Q9ULU4 1186 aaPredicted RBP25.05■■□□□ 1.6
CSPG5-204ENST00000465441 PFASO15067 1338 aa25.05■■□□□ 1.6
CSPG5-204ENST00000465441 COL6A1P12109 1028 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 DPP9Q86TI2 863 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 MB21D1Q8N884 522 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 SHCBP1Q8NEM2 672 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 OSBP2Q969R2 916 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 ATG4CQ96DT6 458 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 KANSL2Q9H9L4 492 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 MYH7P12883 1935 aa25.04■■□□□ 1.6
CSPG5-204ENST00000465441 GSG1L2A8MUP6 293 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 WDR46O15213 610 aaKnown RBP25.03■■□□□ 1.6
CSPG5-204ENST00000465441 IGHA2P01877 340 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 ADORA2AP29274 412 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 CYP2C19P33261 490 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 PLS1Q14651 629 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 SBK1Q52WX2 424 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 SAMD1Q6SPF0 538 aaPredicted RBP25.03■■□□□ 1.6
CSPG5-204ENST00000465441 GPATCH3Q96I76 525 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 ARPP21Q9UBL0 812 aaPredicted RBP25.03■■□□□ 1.6
CSPG5-204ENST00000465441 RLFQ13129 1914 aa25.03■■□□□ 1.6
CSPG5-204ENST00000465441 MYH8P13535 1937 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 RNF113AO15541 343 aaKnown RBP25.02■■□□□ 1.6
CSPG5-204ENST00000465441 CNGA1P29973 690 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 STK11IPQ8N1F8 1099 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 APPBP2Q92624 585 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 GDF15Q99988 308 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.02■■□□□ 1.6
CSPG5-204ENST00000465441 PCDHB15Q9Y5E8 787 aa25.02■■□□□ 1.6
CSPG5-204ENST00000465441 A0A1W2PPC1 479 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 COBLO75128 1261 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 SYN1P17600 705 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 GIMAP6Q6P9H5 292 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 NCAPG2Q86XI2 1143 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 TRPV1Q8NER1 839 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 MROH8Q9H579 483 aa25.01■■□□□ 1.59
CSPG5-204ENST00000465441 DDX20Q9UHI6 824 aaKnown RBP25.01■■□□□ 1.59
CSPG5-204ENST00000465441 MINDY4BA8MYZ0 360 aa25■■□□□ 1.59
CSPG5-204ENST00000465441 TMEM132BQ14DG7 1078 aa25■■□□□ 1.59
CSPG5-204ENST00000465441 FBXO28Q9NVF7 368 aa25■■□□□ 1.59
CSPG5-204ENST00000465441 ADAMTS5Q9UNA0 930 aa25■■□□□ 1.59
CSPG5-204ENST00000465441 BMP8BP34820 402 aa24.99■■□□□ 1.59
CSPG5-204ENST00000465441 OLFML2BQ68BL8 750 aa24.99■■□□□ 1.59
CSPG5-204ENST00000465441 MKNK2Q9HBH9 465 aa24.99■■□□□ 1.59
CSPG5-204ENST00000465441 MSCO60682 206 aa24.98■■□□□ 1.59
CSPG5-204ENST00000465441 ZFYP08048 801 aaPredicted RBP24.98■■□□□ 1.59
CSPG5-204ENST00000465441 RASA1P20936 1047 aa24.98■■□□□ 1.59
CSPG5-204ENST00000465441 LRRC26Q2I0M4 334 aa24.98■■□□□ 1.59
CSPG5-204ENST00000465441 GOPCQ9HD26 462 aa24.98■■□□□ 1.59
CSPG5-204ENST00000465441 M0R2C6 588 aa24.97■■□□□ 1.59
CSPG5-204ENST00000465441 GPAA1O43292 621 aa24.97■■□□□ 1.59
CSPG5-204ENST00000465441 RAD21O60216 631 aa24.97■■□□□ 1.59
CSPG5-204ENST00000465441 CYBAP13498 195 aa24.97■■□□□ 1.59
CSPG5-204ENST00000465441 ABRAQ8N0Z2 381 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms