RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 SMYD4Q8IYR2 804 aaPredicted RBP7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 ZNF507Q8TCN5 953 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 CPLX3Q8WVH0 158 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 TP53INP1Q96A56 240 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 SEC16BQ96JE7 1060 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 TANGO6Q9C0B7 1094 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 ANTXR1Q9H6X2 564 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 DAGLAQ9Y4D2 1042 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 MRVI1Q9Y6F6 885 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 ZMYM3Q14202 1370 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 TNS2Q63HR2 1409 aa7.67□□□□□ -1.18
CACNA1C-223ENST00000465278 HTR3BO95264 441 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 NTF4P34130 210 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 FERD3LQ96RJ6 166 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 REV1Q9UBZ9 1251 aa7.66□□□□□ -1.18
CACNA1C-223ENST00000465278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 CHURC1-FNTBB4DL54 471 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 DYNC1LI2O43237 492 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 SOX9P48436 509 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 ATP7AQ04656 1500 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 PDE4BQ07343 736 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 DOC2BQ14184 412 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 NKG7Q16617 165 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 MYRFLQ96LU7 910 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 SCAPERQ9BY12 1400 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 SEMA6CQ9H3T2 930 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 ACSS3Q9H6R3 686 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 EHMT1Q9H9B1 1298 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
CACNA1C-223ENST00000465278 ZNF518AQ6AHZ1 1483 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 FAM95CA0A1B0GW59 222 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 DNAJA2O60884 412 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 ATE1O95260 518 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 SSBP05455 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 BEND4Q6ZU67 534 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 MCF2L2Q86YR7 1114 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 ACSF2Q96CM8 615 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 GMLQ99445 158 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 TPSG1Q9NRR2 321 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 TJP2Q9UDY2 1190 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 KLHL3Q9UH77 587 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 TACC3Q9Y6A5 838 aa7.64□□□□□ -1.19
CACNA1C-223ENST00000465278 KDM5AP29375 1690 aaKnown RBP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 HMX2A2RU54 273 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 SLC22A31A6NKX4 558 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 HSPA6P17066 643 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 ATP2B1P20020 1258 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 GTF2F1P35269 517 aaKnown RBP eCLIP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 COL9A2Q14055 689 aaPredicted RBP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 HID1Q8IV36 788 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 XAGE3Q8WTP9 111 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 DHX38Q92620 1227 aaKnown RBP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 CRBNQ96SW2 442 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 DPH2Q9BQC3 489 aaPredicted RBP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 SRRTQ9BXP5 876 aaKnown RBP7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 RGPD1P0DJD0 1748 aa7.63□□□□□ -1.19
CACNA1C-223ENST00000465278 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 ETFBP38117 255 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 EIF6P56537 245 aaKnown RBP7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 SLBPQ14493 270 aaKnown RBP eCLIP7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 UVSSAQ2YD98 709 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 RUFY4Q6ZNE9 571 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 MCATQ8IVS2 390 aaKnown RBP7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 TMEM87BQ96K49 555 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 YIPF2Q9BWQ6 316 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 STOML1Q9UBI4 398 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 CTTNBP2Q8WZ74 1663 aa7.62□□□□□ -1.19
CACNA1C-223ENST00000465278 FGRP09769 529 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 CDK5R2Q13319 367 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 TMEM201Q5SNT2 666 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 CLEC10AQ8IUN9 316 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 FAM13CQ8NE31 585 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 SREK1Q8WXA9 508 aaKnown RBP7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 EZH1Q92800 747 aaPredicted RBP7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 DRC1Q96MC2 740 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 RALGAPBQ86X10 1494 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 MYO5CQ9NQX4 1742 aa7.61□□□□□ -1.19
CACNA1C-223ENST00000465278 MAP7Q14244 749 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 ARSHQ5FYA8 562 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 PRAMEF13Q5VWM6 474 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 SLC6A19Q695T7 634 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 GPAT2Q6NUI2 795 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 PAOXQ6QHF9 649 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 ANKLE2Q86XL3 938 aa7.6□□□□□ -1.19
CACNA1C-223ENST00000465278 SHISA5Q8N114 240 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms