RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TXNRD2Q9NNW7 524 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 RBPJLQ9UBG7 517 aa14.55□□□□□ -0.08
XRN1-204ENST00000465074 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
XRN1-204ENST00000465074 SLC3A2P08195 630 aaKnown RBP14.54□□□□□ -0.08
XRN1-204ENST00000465074 KIAA1755Q5JYT7 1200 aa14.54□□□□□ -0.08
XRN1-204ENST00000465074 C12orf42Q96LP6 360 aa14.54□□□□□ -0.08
XRN1-204ENST00000465074 KANSL2Q9H9L4 492 aa14.54□□□□□ -0.08
XRN1-204ENST00000465074 MORF4L1Q9UBU8 362 aa14.54□□□□□ -0.08
XRN1-204ENST00000465074 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
XRN1-204ENST00000465074 TNRC18O15417 2968 aaPredicted RBP14.54□□□□□ -0.08
XRN1-204ENST00000465074 RASA1P20936 1047 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 ERVK-24P63145 666 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 NMIQ13287 307 aaPredicted RBP14.53□□□□□ -0.08
XRN1-204ENST00000465074 MTFR1Q15390 333 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 Q3C1V9 767 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 VPS53Q5VIR6 699 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 SIAH1Q8IUQ4 282 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 TMX2Q9Y320 296 aa14.53□□□□□ -0.08
XRN1-204ENST00000465074 A0A0D9SFI3 127 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 CCL5P13501 91 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 CYP2B6P20813 491 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 UBXN2AP68543 259 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 PDE4BQ07343 736 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 PLS1Q14651 629 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 MCMDC2Q4G0Z9 681 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
XRN1-204ENST00000465074 CHMP4CQ96CF2 233 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 PORCNQ9H237 461 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 GOPCQ9HD26 462 aa14.52□□□□□ -0.09
XRN1-204ENST00000465074 FLOT1O75955 427 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 TSPY3P0CV98 308 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 TSPY8P0CW00 308 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 MAPK4P31152 587 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 PPARAQ07869 468 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 COG2Q14746 738 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 RNF208Q9H0X6 261 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 VCPKMTQ9H867 229 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 INCENPQ9NQS7 918 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 TOMM22Q9NS69 142 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 DIAPH3Q9NSV4 1193 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 CLIP2Q9UDT6 1046 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
XRN1-204ENST00000465074 RABGAP1Q9Y3P9 1069 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
XRN1-204ENST00000465074 ROBO3Q96MS0 1386 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
XRN1-204ENST00000465074 INHAP05111 366 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 SDSP20132 328 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 CCNA1P78396 465 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 TFAP4Q01664 338 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 POTEEQ6S8J3 1075 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 LPAR1Q92633 364 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
XRN1-204ENST00000465074 BTBD7Q9P203 1132 aa14.5□□□□□ -0.09
XRN1-204ENST00000465074 RBBP6Q7Z6E9 1792 aaKnown RBP14.5□□□□□ -0.09
XRN1-204ENST00000465074 CNMDO75829 334 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 IRF5Q13568 498 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 RRP12Q5JTH9 1297 aaKnown RBP14.49□□□□□ -0.09
XRN1-204ENST00000465074 FAM83BQ5T0W9 1011 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 CWC27Q6UX04 472 aaKnown RBP14.49□□□□□ -0.09
XRN1-204ENST00000465074 GPR142Q7Z601 462 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 PLEKHH3Q7Z736 793 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 ZNF589Q86UQ0 364 aaPredicted RBP14.49□□□□□ -0.09
XRN1-204ENST00000465074 ATG4CQ96DT6 458 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 NUP88Q99567 741 aaPredicted RBP14.49□□□□□ -0.09
XRN1-204ENST00000465074 NUDT12Q9BQG2 462 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 UNC93B1Q9H1C4 597 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 OSBPL3Q9H4L5 887 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 GJD2Q9UKL4 321 aa14.49□□□□□ -0.09
XRN1-204ENST00000465074 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 KIAA0100Q14667 2235 aaKnown RBP14.48□□□□□ -0.09
XRN1-204ENST00000465074 WDR46O15213 610 aaKnown RBP14.48□□□□□ -0.09
XRN1-204ENST00000465074 FOXP2O15409 715 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 RANBP6O60518 1105 aaKnown RBP14.48□□□□□ -0.09
XRN1-204ENST00000465074 PDE4AP27815 886 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 HAND2P61296 217 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 LRRC47Q8N1G4 583 aaKnown RBP14.48□□□□□ -0.09
XRN1-204ENST00000465074 PXYLP1Q8TE99 480 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 CEP95Q96GE4 821 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 FBXO28Q9NVF7 368 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 MTMR7Q9Y216 660 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 IVNS1ABPQ9Y6Y0 642 aa14.48□□□□□ -0.09
XRN1-204ENST00000465074 CCDC171Q6TFL3 1326 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 TSPY2A6NKD2 308 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 F5H6K3 240 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 FGAP02671 866 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
XRN1-204ENST00000465074 MFAP1P55081 439 aaKnown RBP14.47□□□□□ -0.09
XRN1-204ENST00000465074 KLRC3Q07444 240 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 TRIM32Q13049 653 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 NYAP2Q9P242 653 aa14.47□□□□□ -0.09
XRN1-204ENST00000465074 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms