RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ANO2Q9NQ90 1003 aa16.19■□□□□ 0.18
LIMD1-203ENST00000465039 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 CYP21A2P08686 494 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
LIMD1-203ENST00000465039 TRDNQ13061 729 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 SMCR8Q8TEV9 937 aaPredicted RBP16.18■□□□□ 0.18
LIMD1-203ENST00000465039 MTA3Q9BTC8 594 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
LIMD1-203ENST00000465039 NEDD4P46934 1319 aa16.18■□□□□ 0.18
LIMD1-203ENST00000465039 FKTNO75072 461 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 GNRH1P01148 92 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 LBX1P52954 281 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 FAM110CQ1W6H9 321 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 C17orf99Q6UX52 265 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 ASCC2Q9H1I8 757 aaPredicted RBP16.17■□□□□ 0.18
LIMD1-203ENST00000465039 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
LIMD1-203ENST00000465039 BCRP11274 1271 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 SP3Q02447 781 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 FAM47AQ5JRC9 791 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 RCSD1Q6JBY9 416 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 ANKS1AQ92625 1134 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 GMCL1Q96IK5 515 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 A0A0G2JMZ2 1700 aa16.16■□□□□ 0.18
LIMD1-203ENST00000465039 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
LIMD1-203ENST00000465039 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
LIMD1-203ENST00000465039 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
LIMD1-203ENST00000465039 NCOA7Q8NI08 942 aa16.15■□□□□ 0.18
LIMD1-203ENST00000465039 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
LIMD1-203ENST00000465039 HOXC10Q9NYD6 342 aa16.15■□□□□ 0.18
LIMD1-203ENST00000465039 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
LIMD1-203ENST00000465039 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
LIMD1-203ENST00000465039 F5H6K3 240 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 KDM4AO75164 1064 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 CYP2C8P10632 490 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 ZKSCAN1P17029 563 aaPredicted RBP16.14■□□□□ 0.17
LIMD1-203ENST00000465039 HERVK_113P62684 666 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 ATP2B2Q01814 1243 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 KLRC3Q07444 240 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 KRT32Q14532 448 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 COG2Q14746 738 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 ZYXQ15942 572 aaKnown RBP16.14■□□□□ 0.17
LIMD1-203ENST00000465039 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
LIMD1-203ENST00000465039 PARP14Q460N5 1801 aa16.14■□□□□ 0.17
LIMD1-203ENST00000465039 B4E1Z4 1266 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 E7EWF7 191 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 SLC27A2O14975 620 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 PLA2G6O60733 806 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 NDUFB10O96000 172 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 FDX1P10109 184 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 LACTBP83111 547 aaPredicted RBP16.13■□□□□ 0.17
LIMD1-203ENST00000465039 KIF22Q14807 665 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
LIMD1-203ENST00000465039 PKN2Q16513 984 aaKnown RBP16.13■□□□□ 0.17
LIMD1-203ENST00000465039 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 KCNB2Q92953 911 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 ZSCAN10Q96SZ4 725 aaPredicted RBP16.13■□□□□ 0.17
LIMD1-203ENST00000465039 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 TSKSQ9UJT2 592 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 RLFQ13129 1914 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
LIMD1-203ENST00000465039 PRMT2P55345 433 aa16.12■□□□□ 0.17
LIMD1-203ENST00000465039 DGKZQ13574 1117 aa16.12■□□□□ 0.17
LIMD1-203ENST00000465039 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
LIMD1-203ENST00000465039 ADAMTS5Q9UNA0 930 aa16.12■□□□□ 0.17
LIMD1-203ENST00000465039 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
LIMD1-203ENST00000465039 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
LIMD1-203ENST00000465039 HMGB1P09429 215 aaKnown RBP16.11■□□□□ 0.17
LIMD1-203ENST00000465039 HSPA4P34932 840 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 CCNA1P78396 465 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 KIAA1755Q5JYT7 1200 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 CTU1Q7Z7A3 348 aaKnown RBP16.11■□□□□ 0.17
LIMD1-203ENST00000465039 SPICE1Q8N0Z3 855 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 ENAHQ8N8S7 591 aaPredicted RBP16.11■□□□□ 0.17
LIMD1-203ENST00000465039 P2RX7Q99572 595 aaKnown RBP16.11■□□□□ 0.17
LIMD1-203ENST00000465039 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 TNKSO95271 1327 aa16.11■□□□□ 0.17
LIMD1-203ENST00000465039 ERICH2A1L162 156 aa16.1■□□□□ 0.17
LIMD1-203ENST00000465039 NMT2O60551 498 aa16.1■□□□□ 0.17
LIMD1-203ENST00000465039 FLOT1O75955 427 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms