RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 TJP1Q07157 1748 aa14.21□□□□□ -0.13
CLCNKA-204ENST00000464764 BAZ2BQ9UIF8 2168 aaKnown RBP14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 TTC26A0AVF1 554 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 RPS6KA5O75582 802 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 NDUFA10O95299 355 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 GGCXP38435 758 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 MAGEA9P43362 315 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 TTF1Q15361 905 aaPredicted RBP14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 ZBTB38Q8NAP3 1195 aaPredicted RBP14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 EFCC1Q9HA90 598 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 SLC4A4Q9Y6R1 1079 aa14.21□□□□□ -0.14
CLCNKA-204ENST00000464764 MYH8P13535 1937 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 PRPF6O94906 941 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 PDE8BO95263 885 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 USP14P54578 494 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 PKN1Q16512 942 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 TRAPPC11Q7Z392 1133 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 GPIHBP1Q8IV16 184 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 GSDMAQ96QA5 445 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 HPCAL4Q9UM19 191 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 RCCD1A6NED2 376 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 KCNJ18B7U540 433 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 FECHP22830 423 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 PTGDRQ13258 359 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 KCNJ12Q14500 433 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 NELFBQ8WX92 580 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 GBP3Q9H0R5 595 aa14.2□□□□□ -0.14
CLCNKA-204ENST00000464764 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 CAMTA1Q9Y6Y1 1673 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 PDE2AO00408 941 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 VEGFAP15692 232 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 TCP11X2Q5H9J9 407 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 FKBP15Q5T1M5 1219 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 TTC19Q6DKK2 380 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 WDR93Q6P2C0 686 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 SDR42E1Q8WUS8 393 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 ZC3H4Q9UPT8 1303 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 ERICH2A1L162 156 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 CORO7P57737 925 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 HERVK_113P62684 666 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 TUBB2AQ13885 445 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 SPATA5Q8NB90 893 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 TUBB2BQ9BVA1 445 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 KRT23Q9C075 422 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 LACRTQ9GZZ8 138 aa14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 GNL3LQ9NVN8 582 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 LIMA1Q9UHB6 759 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-204ENST00000464764 GLI3P10071 1580 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 CYP2D7A0A087X1C5 515 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 GTF2A1P52655 376 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 PMS1P54277 932 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 ALX1Q15699 326 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 IL17AQ16552 155 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 IRF2BP1Q8IU81 584 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 MED4Q9NPJ6 270 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 AKAP11Q9UKA4 1901 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 LRRC10BA6NIK2 292 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 AGPSO00116 658 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 WDR59Q6PJI9 974 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 MSL3Q8N5Y2 521 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 ZCRB1Q8TBF4 217 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 DRC1Q96MC2 740 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 ITIH6Q6UXX5 1313 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 PRCPP42785 496 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 KLK7P49862 253 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 STIM1Q13586 685 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 EZH2Q15910 746 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 UBAC1Q9BSL1 405 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 CNNM2Q9H8M5 875 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 MKRN1Q9UHC7 482 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 SAR1BQ9Y6B6 198 aa14.18□□□□□ -0.14
CLCNKA-204ENST00000464764 KRT2P35908 639 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 CYP27A1Q02318 531 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 PAK1Q13153 545 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 ICE2Q659A1 982 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 PLIN2Q99541 437 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 LMTK3Q96Q04 1460 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 PPFIA4O75335 1185 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms