RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CABP5Q9NP86 173 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 ZNF219Q9P2Y4 722 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 MAD2L2Q9UI95 211 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 HPSEQ9Y251 543 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 CDC42EP5Q6NZY7 148 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 SHC4Q6S5L8 630 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 SUPT20HQ8NEM7 779 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 LZTS2Q9BRK4 669 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 MORC2Q9Y6X9 1032 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 PLIN4Q96Q06 1357 aa24.96■■□□□ 1.59
PDLIM2-216ENST00000464275 CRKP46108 304 aa24.95■■□□□ 1.58
PDLIM2-216ENST00000464275 GABPAQ06546 454 aa24.95■■□□□ 1.58
PDLIM2-216ENST00000464275 DDX4Q9NQI0 724 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-216ENST00000464275 GREB1LQ9C091 1923 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-216ENST00000464275 MYH4Q9Y623 1939 aa24.95■■□□□ 1.58
PDLIM2-216ENST00000464275 NOVP48745 357 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 HDLBPQ00341 1268 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 APOBEC3HQ6NTF7 200 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 STAG2Q8N3U4 1231 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 SH3GLB2Q9NR46 395 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 KCNQ5Q9NR82 932 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 PCDHB6Q9Y5E3 794 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 C10orf71Q711Q0 1435 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 PALM3A6NDB9 673 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 SYKP43405 635 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 DACT2Q5SW24 774 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 ZDHHC15Q96MV8 337 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 DNAJC25Q9H1X3 360 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 SWAP70Q9UH65 585 aa24.94■■□□□ 1.58
PDLIM2-216ENST00000464275 TOP1P11387 765 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 ZNF165P49910 485 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 NPY5RQ15761 445 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 TNFRSF25Q93038 417 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 OSBPL5Q9H0X9 879 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 ANO10Q9NW15 660 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 MYO3BQ8WXR4 1341 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 KIF13BQ9NQT8 1826 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 PTPREP23469 700 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 NLRP5P59047 1200 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 PIBF1Q8WXW3 757 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 CLIC6Q96NY7 704 aa24.93■■□□□ 1.58
PDLIM2-216ENST00000464275 SIPA1L1O43166 1804 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 TRIM75PA6NK02 468 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 GOLGA6L6A8MZA4 724 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 CALML3P27482 149 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 GRIPAP1Q4V328 841 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 LUZP1Q86V48 1076 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 CEP95Q96GE4 821 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 KIAA1468Q9P260 1216 aa24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 FBXO2Q9UK22 296 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-216ENST00000464275 BMP15O95972 392 aa24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 ZNF579Q8NAF0 562 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 SERPINB13Q9UIV8 391 aa24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 HSP90AA2PQ14568 343 aaPredicted RBP24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 AOC3Q16853 763 aa24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 R3HCC1Q9Y3T6 440 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 SRPRBQ9Y5M8 271 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-216ENST00000464275 HLA-DOAP06340 250 aa24.9■■□□□ 1.58
PDLIM2-216ENST00000464275 EARS2Q5JPH6 523 aaKnown RBP24.9■■□□□ 1.58
PDLIM2-216ENST00000464275 KIAA0825Q8IV33 1275 aa24.9■■□□□ 1.58
PDLIM2-216ENST00000464275 FAM177A1Q8N128 213 aaPredicted RBP24.9■■□□□ 1.58
PDLIM2-216ENST00000464275 FAM205CA6NFA0 338 aa24.89■■□□□ 1.58
PDLIM2-216ENST00000464275 PARP1P09874 1014 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-216ENST00000464275 ATP2B1P20020 1258 aa24.89■■□□□ 1.58
PDLIM2-216ENST00000464275 SPZ1Q9BXG8 430 aa24.89■■□□□ 1.58
PDLIM2-216ENST00000464275 FAM13BQ9NYF5 915 aa24.89■■□□□ 1.58
PDLIM2-216ENST00000464275 SMARCA1P28370 1054 aa24.89■■□□□ 1.57
PDLIM2-216ENST00000464275 PLCB2Q00722 1185 aa24.89■■□□□ 1.57
PDLIM2-216ENST00000464275 KLRF2D3W0D1 207 aa24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 AP5Z1O43299 807 aa24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 VEGFAP15692 232 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 C11orf57Q6ZUT1 292 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 SLC16A10Q8TF71 515 aa24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 KCNH3Q9ULD8 1083 aa24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 MTMR7Q9Y216 660 aa24.88■■□□□ 1.57
PDLIM2-216ENST00000464275 IGKV6D-41A0A0C4DH26 115 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 CYTH3O43739 400 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 TRAPPC10P48553 1259 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 IQCB1Q15051 598 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 ZRSR1Q15695 479 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 SLC35G1Q2M3R5 365 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 DEFB132Q7Z7B7 95 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 CCDC148Q8NFR7 591 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 PDGFDQ9GZP0 370 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 EHD4Q9H223 541 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 MTMR4Q9NYA4 1195 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 SERPINA10Q9UK55 444 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 AKR1B1P15121 316 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 ELOA2Q8IYF1 753 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 BLIDQ8IZY5 108 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 TTLL6Q8N841 843 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 PCDHA4Q9UN74 947 aa24.87■■□□□ 1.57
PDLIM2-216ENST00000464275 PPIP5K2O43314 1243 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 C21orf2O43822 256 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 TTC38Q5R3I4 469 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 GALNT17Q6IS24 598 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 CEP57L1Q8IYX8 460 aa24.86■■□□□ 1.57
PDLIM2-216ENST00000464275 ERCC4Q92889 916 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms