RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TLR3O15455 904 aaKnown RBP7.41□□□□□ -1.22
ITGB1-208ENST00000464001 HPXP02790 462 aa7.41□□□□□ -1.22
ITGB1-208ENST00000464001 LTKP29376 864 aa7.41□□□□□ -1.22
ITGB1-208ENST00000464001 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
ITGB1-208ENST00000464001 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
ITGB1-208ENST00000464001 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
ITGB1-208ENST00000464001 KIF2CQ99661 725 aa7.41□□□□□ -1.22
ITGB1-208ENST00000464001 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
ITGB1-208ENST00000464001 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
ITGB1-208ENST00000464001 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-208ENST00000464001 FBXO15Q8NCQ5 510 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-208ENST00000464001 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
ITGB1-208ENST00000464001 LRRC3Q9BY71 257 aa7.4□□□□□ -1.22
ITGB1-208ENST00000464001 KCNQ5Q9NR82 932 aa7.4□□□□□ -1.22
ITGB1-208ENST00000464001 RGS13O14921 159 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 GREM1O60565 184 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 ERVFC1P60507 584 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 CLEC16AQ2KHT3 1053 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 HS2ST1Q7LGA3 356 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 OXR1Q8N573 874 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 DIRC2Q96SL1 478 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-208ENST00000464001 NSUN3Q9H649 340 aaKnown RBP7.39□□□□□ -1.23
ITGB1-208ENST00000464001 GGT7Q9UJ14 662 aa7.39□□□□□ -1.23
ITGB1-208ENST00000464001 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
ITGB1-208ENST00000464001 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 DNAJA2O60884 412 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 ATE1O95260 518 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 TSPAN15O95858 294 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 RAG1P15918 1043 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-208ENST00000464001 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 PCDHA11Q9Y5I1 949 aa7.38□□□□□ -1.23
ITGB1-208ENST00000464001 ZGLP1P0C6A0 271 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 RNF4P78317 190 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
ITGB1-208ENST00000464001 ARSHQ5FYA8 562 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 LILRA2Q8N149 483 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 ENOX1Q8TC92 643 aaKnown RBP7.37□□□□□ -1.23
ITGB1-208ENST00000464001 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-208ENST00000464001 GMIPQ9P107 970 aa7.37□□□□□ -1.23
ITGB1-208ENST00000464001 FITM1A5D6W6 292 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 NFIBO00712 420 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.36□□□□□ -1.23
ITGB1-208ENST00000464001 EPB41L4BQ9H329 900 aa7.36□□□□□ -1.23
ITGB1-208ENST00000464001 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
ITGB1-208ENST00000464001 DUSP4Q13115 394 aa7.35□□□□□ -1.23
ITGB1-208ENST00000464001 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
ITGB1-208ENST00000464001 EHMT1Q9H9B1 1298 aa7.35□□□□□ -1.23
ITGB1-208ENST00000464001 SHISA3A0PJX4 238 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 UBOX5O94941 541 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 TMEM253P0C7T8 217 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 TRHRP34981 398 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-208ENST00000464001 CHRNEQ04844 493 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-208ENST00000464001 NR0B2Q15466 257 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
ITGB1-208ENST00000464001 RNF32Q9H0A6 362 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 SP110Q9HB58 689 aa7.34□□□□□ -1.23
ITGB1-208ENST00000464001 ZNF165P49910 485 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 TEKQ02763 1124 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 ANKS4BQ8N8V4 417 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-208ENST00000464001 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-208ENST00000464001 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 SLC6A17Q9H1V8 727 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
ITGB1-208ENST00000464001 ADAMTS1Q9UHI8 967 aa7.33□□□□□ -1.24
ITGB1-208ENST00000464001 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 MCM4P33991 863 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 CCNFP41002 786 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 CRKP46108 304 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 SNX17Q15036 470 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
ITGB1-208ENST00000464001 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-208ENST00000464001 OVOS1Q6IE37 1185 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 RNF111Q6ZNA4 994 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 TMEM87AQ8NBN3 555 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 DAGLBQ8NCG7 672 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 UBP1Q9NZI7 540 aa7.32□□□□□ -1.24
ITGB1-208ENST00000464001 SSU72P8A0A1W2PR75 194 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 CLCQ05315 142 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 IRF2BP1Q8IU81 584 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 CILP2Q8IUL8 1156 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms