RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 GPBAR1Q8TDU6 330 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 METTL22Q9BUU2 404 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 TRAIPQ9BWF2 469 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 RNF19AQ9NV58 838 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 ZC3H7BQ9UGR2 993 aaKnown RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 PXDNQ92626 1479 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 NRXN3Q9Y4C0 1643 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 FAM83GA6ND36 823 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 ENC1O14682 589 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 NME2P22392 152 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 IRAK1P51617 712 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 R3HDM1Q15032 1099 aaKnown RBP5.3□□□□□ -1.56
SCFD1-204ENST00000463622 RASIP1Q5U651 963 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 AEBP1Q8IUX7 1158 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 SMYD4Q8IYR2 804 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-204ENST00000463622 KRT82Q9NSB4 513 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 CCDC39Q9UFE4 941 aa5.3□□□□□ -1.56
SCFD1-204ENST00000463622 COL22A1Q8NFW1 1626 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-204ENST00000463622 NEFMP07197 916 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 BMP6P22004 513 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 GSTT1P30711 240 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 NFXL1Q6ZNB6 911 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 KRT28Q7Z3Y7 464 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ACSBG1Q96GR2 724 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 CAMKK2Q96RR4 588 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ATXN3LQ9H3M9 355 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
SCFD1-204ENST00000463622 RPGRIP1LQ68CZ1 1315 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 GLI3P10071 1580 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-204ENST00000463622 LEFTY1O75610 366 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 FAM87AP0C7U9 286 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 TAL1P17542 331 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ZNF252P-AS1Q0IIN9 211 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ALG1LQ6GMV1 187 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 ABI1Q8IZP0 508 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 FAM181AQ8N9Y4 354 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 FBF1Q8TES7 1133 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 SSU72Q9NP77 194 aaKnown RBP5.29□□□□□ -1.56
SCFD1-204ENST00000463622 U3KQE9 123 aa5.29□□□□□ -1.56
SCFD1-204ENST00000463622 SYNGAP1Q96PV0 1343 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 DISP2A7MBM2 1401 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 MYO5BQ9ULV0 1848 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 DCDC2CA8MYV0 355 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 LDHBP07195 334 aaKnown RBP5.28□□□□□ -1.56
SCFD1-204ENST00000463622 CELA3AP09093 270 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 USP17L7P0C7H9 530 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 ATP2B2Q01814 1243 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 ZC3H12AQ5D1E8 599 aaKnown RBP5.28□□□□□ -1.56
SCFD1-204ENST00000463622 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 C12orf40Q86WS4 652 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 ISL2Q96A47 359 aa5.28□□□□□ -1.56
SCFD1-204ENST00000463622 DHX57Q6P158 1386 aaKnown RBP5.28□□□□□ -1.56
SCFD1-204ENST00000463622 CYP27A1Q02318 531 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
SCFD1-204ENST00000463622 WAPLQ7Z5K2 1190 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 UBE3DQ7Z6J8 389 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 TP53INP2Q8IXH6 220 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 EMILIN2Q9BXX0 1053 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCFD1-204ENST00000463622 C12orf49Q9H741 205 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-204ENST00000463622 SPG7Q9UQ90 795 aa5.27□□□□□ -1.57
SCFD1-204ENST00000463622 CCDC9Q9Y3X0 531 aaKnown RBP5.27□□□□□ -1.57
SCFD1-204ENST00000463622 E9PCH4 1651 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 ABCC11Q96J66 1382 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 PTPN11Q06124 597 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-204ENST00000463622 BNIP3Q12983 259 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 ZNF574Q6ZN55 896 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-204ENST00000463622 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCFD1-204ENST00000463622 SRCIN1Q9C0H9 1055 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 ADGRE2Q9UHX3 823 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 PCOLCE2Q9UKZ9 415 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 SBNO1A3KN83 1393 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 NEXMIFQ5QGS0 1516 aa5.26□□□□□ -1.57
SCFD1-204ENST00000463622 NALCNQ8IZF0 1738 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 RBAK-RBAKDNI3L0D1 243 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 COL19A1Q14993 1142 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
SCFD1-204ENST00000463622 FLCNQ8NFG4 579 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 CEP44Q9C0F1 390 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 SPATA31A5Q5VU36 1347 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 SPATA31A7Q8IWB4 1347 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 CCDC144AA2RUR9 1427 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 SPHKAPQ2M3C7 1700 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 ANKRD33BA6NCL7 494 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 PRNPP04156 253 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 ERVK-24P63145 666 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 INPP5AQ14642 412 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 CYP27C1Q4G0S4 372 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 LLGL2Q6P1M3 1020 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 FAM196AQ6ZSG2 479 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 VSIG10LQ86VR7 867 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 TOP6BLQ8N6T0 577 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms