RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 FAM173BQ6P4H8 233 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 CDAN1Q8IWY9 1227 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 HACL1Q9UJ83 578 aa22.03■■□□□ 1.12
CCDC78-206ENST00000463539 V9GY48 417 aaPredicted RBP22.03■■□□□ 1.12
CCDC78-206ENST00000463539 MYH8P13535 1937 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 PARP1P09874 1014 aaKnown RBP22.02■■□□□ 1.12
CCDC78-206ENST00000463539 KRT85P78386 507 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 ATP2B2Q01814 1243 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 C9orf131Q5VYM1 1079 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 STAG2Q8N3U4 1231 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 LZTS2Q9BRK4 669 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 LMBRD1Q9NUN5 540 aa22.02■■□□□ 1.12
CCDC78-206ENST00000463539 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.12
CCDC78-206ENST00000463539 PALM3A6NDB9 673 aaPredicted RBP22.01■■□□□ 1.11
CCDC78-206ENST00000463539 TRAK2O60296 914 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 TBC1D12O60347 775 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 SHROOM1Q2M3G4 852 aaPredicted RBP22.01■■□□□ 1.11
CCDC78-206ENST00000463539 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 CABP5Q9NP86 173 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
CCDC78-206ENST00000463539 PGAP2Q9UHJ9 254 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 ASTN2O75129 1339 aaPredicted RBP22.01■■□□□ 1.11
CCDC78-206ENST00000463539 FIBPO43427 364 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 ICA1Q05084 483 aa22.01■■□□□ 1.11
CCDC78-206ENST00000463539 SCAF8Q9UPN6 1271 aaKnown RBP22.01■■□□□ 1.11
CCDC78-206ENST00000463539 GREB1LQ9C091 1923 aaPredicted RBP22■■□□□ 1.11
CCDC78-206ENST00000463539 hCG_1642624A0A1W2PR95 340 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 GH2P01242 217 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 XBP1P17861 261 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 KIF23Q02241 960 aaPredicted RBP22■■□□□ 1.11
CCDC78-206ENST00000463539 SEPT2Q15019 361 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 PKN1Q16512 942 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 GPR162Q16538 588 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 CSPP1Q1MSJ5 1256 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 SKOR2Q2VWA4 1001 aaPredicted RBP22■■□□□ 1.11
CCDC78-206ENST00000463539 RASGRP2Q7LDG7 609 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 TMEM87AQ8NBN3 555 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 TRPM4Q8TD43 1214 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 NYAP2Q9P242 653 aa22■■□□□ 1.11
CCDC78-206ENST00000463539 USP17L5A8MUK1 530 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 DDNO94850 711 aaPredicted RBP21.99■■□□□ 1.11
CCDC78-206ENST00000463539 GOLGA8HP0CJ92 632 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 PDHBP11177 359 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 EEF2P13639 858 aaKnown RBP21.99■■□□□ 1.11
CCDC78-206ENST00000463539 USP17L2Q6R6M4 530 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 SBF1O95248 1867 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 KLRF2D3W0D1 207 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 EPS15P42566 896 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
CCDC78-206ENST00000463539 MIGA2Q7L4E1 593 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 BRAPQ7Z569 592 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 USP48Q86UV5 1035 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 DEFB129Q9H1M3 183 aa21.99■■□□□ 1.11
CCDC78-206ENST00000463539 SNHG28P0DPA3 235 aa21.98■■□□□ 1.11
CCDC78-206ENST00000463539 LMOD1P29536 600 aaPredicted RBP21.98■■□□□ 1.11
CCDC78-206ENST00000463539 GNL2Q13823 731 aaKnown RBP21.98■■□□□ 1.11
CCDC78-206ENST00000463539 SAFBQ15424 915 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC78-206ENST00000463539 ASPRV1Q53RT3 343 aa21.98■■□□□ 1.11
CCDC78-206ENST00000463539 ANGEL2Q5VTE6 544 aaKnown RBP21.98■■□□□ 1.11
CCDC78-206ENST00000463539 APOBEC3FQ8IUX4 373 aaKnown RBP21.98■■□□□ 1.11
CCDC78-206ENST00000463539 MKL1Q969V6 931 aa21.98■■□□□ 1.11
CCDC78-206ENST00000463539 TEPSINQ96N21 525 aa21.98■■□□□ 1.11
CCDC78-206ENST00000463539 MMP1P03956 469 aa21.97■■□□□ 1.11
CCDC78-206ENST00000463539 JAG1P78504 1218 aa21.97■■□□□ 1.11
CCDC78-206ENST00000463539 SCAND2PQ9GZW5 306 aaPredicted RBP21.97■■□□□ 1.11
CCDC78-206ENST00000463539 KIF28PB7ZC32 967 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 SCG2P13521 617 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 MAP3K10Q02779 954 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 PFKFB3Q16875 520 aaPredicted RBP21.96■■□□□ 1.11
CCDC78-206ENST00000463539 PIBF1Q8WXW3 757 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 SPZ1Q9BXG8 430 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 VPS54Q9P1Q0 977 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 CFAP45Q9UL16 551 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 KCNJ14Q9UNX9 436 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 DDX49Q9Y6V7 483 aaKnown RBP21.96■■□□□ 1.11
CCDC78-206ENST00000463539 ZNF396Q96N95 335 aaPredicted RBP21.96■■□□□ 1.11
CCDC78-206ENST00000463539 TFIP11Q9UBB9 837 aaKnown RBP21.96■■□□□ 1.11
CCDC78-206ENST00000463539 ZBTB21Q9ULJ3 1066 aa21.96■■□□□ 1.11
CCDC78-206ENST00000463539 FRMPD2Q68DX3 1309 aaPredicted RBP21.96■■□□□ 1.11
CCDC78-206ENST00000463539 CYTH3O43739 400 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 SMARCA1P28370 1054 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 SLC35G1Q2M3R5 365 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 ATL3Q6DD88 541 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 SIAH1Q8IUQ4 282 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 GGA3Q9NZ52 723 aa21.95■■□□□ 1.1
CCDC78-206ENST00000463539 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 ZNF543Q08ER8 600 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 KLHL40Q2TBA0 621 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 DIS3L2Q8IYB7 885 aaKnown RBP21.94■■□□□ 1.1
CCDC78-206ENST00000463539 ADARB2Q9NS39 739 aaKnown RBP21.94■■□□□ 1.1
CCDC78-206ENST00000463539 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC78-206ENST00000463539 HIRAP54198 1017 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-206ENST00000463539 CCDC96Q2M329 555 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 GPATCH4Q5T3I0 446 aaKnown RBP21.94■■□□□ 1.1
CCDC78-206ENST00000463539 SPATA32Q96LK8 384 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 CPVLQ9H3G5 476 aa21.94■■□□□ 1.1
CCDC78-206ENST00000463539 RAD21O60216 631 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 CAP2P40123 477 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 MYSM1Q5VVJ2 828 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 DPY19L2Q6NUT2 758 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms