RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
HDAC6-213ENST00000462730 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 GMLQ99445 158 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 XBP1P17861 261 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 TCP10Q12799 353 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-213ENST00000462730 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 FAM198AQ9UFP1 575 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-213ENST00000462730 ADALQ6DHV7 355 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 NEDD1Q8NHV4 660 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
HDAC6-213ENST00000462730 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 PRMT6Q96LA8 375 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-213ENST00000462730 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
HDAC6-213ENST00000462730 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
HDAC6-213ENST00000462730 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 A0A1W2PQD8 194 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 TERF1P54274 439 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 RASSF7Q02833 373 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 CXCL9Q07325 125 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 GRM4Q14833 912 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 CKAP2LQ8IYA6 745 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 STX8Q9UNK0 236 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 PLIN4Q96Q06 1357 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
HDAC6-213ENST00000462730 OFD1O75665 1012 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 NR5A1Q13285 461 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 CIAPIN1Q6FI81 312 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 RBM43Q6ZSC3 357 aaKnown RBP16.67■□□□□ 0.26
HDAC6-213ENST00000462730 AGBL3Q8NEM8 1001 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 ENGASEQ8NFI3 743 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 EHD4Q9H223 541 aa16.67■□□□□ 0.26
HDAC6-213ENST00000462730 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 PTPAQ15257 358 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 SHMT1P34896 483 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 KRT2P35908 639 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 TYRO3Q06418 890 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
HDAC6-213ENST00000462730 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
HDAC6-213ENST00000462730 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-213ENST00000462730 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 SCG2P13521 617 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 AKR1B1P15121 316 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 GNAQP50148 359 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 PRELPP51888 382 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 DLGAP5Q15398 846 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-213ENST00000462730 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-213ENST00000462730 ZSCAN29Q8IWY8 852 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-213ENST00000462730 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
HDAC6-213ENST00000462730 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 PPP6R2O75170 966 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 TOB1P50616 345 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-213ENST00000462730 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-213ENST00000462730 FMR1NBQ8N0W7 255 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-213ENST00000462730 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-213ENST00000462730 CTAGE5O15320 804 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 ENTPD3O75355 529 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.25
HDAC6-213ENST00000462730 NDUFA8P51970 172 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 UVSSAQ2YD98 709 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 RILPL1Q5EBL4 403 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
HDAC6-213ENST00000462730 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms