RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
APP-211ENST00000462267 ABRAQ8N0Z2 381 aa18.72■□□□□ 0.59
APP-211ENST00000462267 ACER1Q8TDN7 264 aa18.72■□□□□ 0.59
APP-211ENST00000462267 TOX2Q96NM4 488 aa18.72■□□□□ 0.59
APP-211ENST00000462267 SPATC1LQ9H0A9 340 aa18.72■□□□□ 0.59
APP-211ENST00000462267 PRDM12Q9H4Q4 367 aa18.72■□□□□ 0.59
APP-211ENST00000462267 XPNPEP3Q9NQH7 507 aa18.72■□□□□ 0.59
APP-211ENST00000462267 DCDC2CA8MYV0 355 aa18.71■□□□□ 0.59
APP-211ENST00000462267 IGSF3O75054 1194 aa18.71■□□□□ 0.59
APP-211ENST00000462267 RARBP10826 455 aa18.71■□□□□ 0.59
APP-211ENST00000462267 ERCC3P19447 782 aa18.71■□□□□ 0.59
APP-211ENST00000462267 COG2Q14746 738 aa18.71■□□□□ 0.59
APP-211ENST00000462267 CCDC174Q6PII3 467 aa18.71■□□□□ 0.59
APP-211ENST00000462267 ANKRD33Q7Z3H0 272 aa18.71■□□□□ 0.59
APP-211ENST00000462267 SLC44A5Q8NCS7 719 aa18.71■□□□□ 0.59
APP-211ENST00000462267 PBX4Q9BYU1 374 aa18.71■□□□□ 0.59
APP-211ENST00000462267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
APP-211ENST00000462267 SYNGAP1Q96PV0 1343 aa18.71■□□□□ 0.59
APP-211ENST00000462267 A0A1W2PQ45 241 aaPredicted RBP18.7■□□□□ 0.58
APP-211ENST00000462267 A0A1W2PQY0 241 aa18.7■□□□□ 0.58
APP-211ENST00000462267 FAAP100Q0VG06 881 aa18.7■□□□□ 0.58
APP-211ENST00000462267 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
APP-211ENST00000462267 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
APP-211ENST00000462267 CCDC129Q6ZRS4 1044 aa18.7■□□□□ 0.58
APP-211ENST00000462267 ADGRA1Q86SQ6 560 aa18.7■□□□□ 0.58
APP-211ENST00000462267 MAML3Q96JK9 1138 aa18.7■□□□□ 0.58
APP-211ENST00000462267 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.7■□□□□ 0.58
APP-211ENST00000462267 EHD4Q9H223 541 aa18.7■□□□□ 0.58
APP-211ENST00000462267 MROH8Q9H579 483 aa18.7■□□□□ 0.58
APP-211ENST00000462267 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
APP-211ENST00000462267 TIMP1P01033 207 aa18.69■□□□□ 0.58
APP-211ENST00000462267 ABCB5Q2M3G0 1257 aa18.69■□□□□ 0.58
APP-211ENST00000462267 CERKLQ49MI3 558 aaPredicted RBP18.69■□□□□ 0.58
APP-211ENST00000462267 MB21D1Q8N884 522 aa18.69■□□□□ 0.58
APP-211ENST00000462267 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
APP-211ENST00000462267 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
APP-211ENST00000462267 SERPINB13Q9UIV8 391 aa18.69■□□□□ 0.58
APP-211ENST00000462267 PBX2P40425 430 aa18.68■□□□□ 0.58
APP-211ENST00000462267 PPIGQ13427 754 aaKnown RBP eCLIP18.68■□□□□ 0.58
APP-211ENST00000462267 ADGRE1Q14246 886 aa18.68■□□□□ 0.58
APP-211ENST00000462267 CCDC85BQ15834 202 aaPredicted RBP18.68■□□□□ 0.58
APP-211ENST00000462267 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
APP-211ENST00000462267 ZNF521Q96K83 1311 aa18.68■□□□□ 0.58
APP-211ENST00000462267 FOCADQ5VW36 1801 aa18.67■□□□□ 0.58
APP-211ENST00000462267 PGK1P00558 417 aa18.67■□□□□ 0.58
APP-211ENST00000462267 IGFBP4P22692 258 aa18.67■□□□□ 0.58
APP-211ENST00000462267 MTX1Q13505 466 aa18.67■□□□□ 0.58
APP-211ENST00000462267 TMEM240Q5SV17 173 aa18.67■□□□□ 0.58
APP-211ENST00000462267 MFSD5Q6N075 450 aa18.67■□□□□ 0.58
APP-211ENST00000462267 CERS3Q8IU89 383 aa18.67■□□□□ 0.58
APP-211ENST00000462267 TSEN34Q9BSV6 310 aaKnown RBP18.67■□□□□ 0.58
APP-211ENST00000462267 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
APP-211ENST00000462267 CXXC1Q9P0U4 656 aaPredicted RBP18.67■□□□□ 0.58
APP-211ENST00000462267 HCN4Q9Y3Q4 1203 aa18.67■□□□□ 0.58
APP-211ENST00000462267 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
APP-211ENST00000462267 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
APP-211ENST00000462267 FCER1AP12319 257 aa18.66■□□□□ 0.58
APP-211ENST00000462267 RAB30Q15771 203 aa18.66■□□□□ 0.58
APP-211ENST00000462267 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
APP-211ENST00000462267 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
APP-211ENST00000462267 NUP133Q8WUM0 1156 aa18.66■□□□□ 0.58
APP-211ENST00000462267 MEIS3Q99687 375 aa18.66■□□□□ 0.58
APP-211ENST00000462267 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
APP-211ENST00000462267 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
APP-211ENST00000462267 MSRAQ9UJ68 235 aa18.66■□□□□ 0.58
APP-211ENST00000462267 TBX21Q9UL17 535 aa18.66■□□□□ 0.58
APP-211ENST00000462267 CHD9Q3L8U1 2897 aa18.65■□□□□ 0.58
APP-211ENST00000462267 GRXCR1A8MXD5 290 aa18.65■□□□□ 0.58
APP-211ENST00000462267 BMP1P13497 986 aa18.65■□□□□ 0.58
APP-211ENST00000462267 C16orf59Q7L2K0 433 aa18.65■□□□□ 0.58
APP-211ENST00000462267 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
APP-211ENST00000462267 SMCHD1A6NHR9 2005 aa18.65■□□□□ 0.58
APP-211ENST00000462267 PIEZO1Q92508 2521 aa18.64■□□□□ 0.57
APP-211ENST00000462267 E9PSI1 815 aa18.64■□□□□ 0.57
APP-211ENST00000462267 CYP2E1P05181 493 aaPredicted RBP18.64■□□□□ 0.57
APP-211ENST00000462267 AKR1A1P14550 325 aa18.64■□□□□ 0.57
APP-211ENST00000462267 USP5P45974 858 aa18.64■□□□□ 0.57
APP-211ENST00000462267 ACLYP53396 1101 aa18.64■□□□□ 0.57
APP-211ENST00000462267 DYNLL1P63167 89 aaKnown RBP18.64■□□□□ 0.57
APP-211ENST00000462267 PLS1Q14651 629 aa18.64■□□□□ 0.57
APP-211ENST00000462267 AAK1Q2M2I8 961 aa18.64■□□□□ 0.57
APP-211ENST00000462267 TTC39AQ5SRH9 613 aa18.64■□□□□ 0.57
APP-211ENST00000462267 PSRC1Q6PGN9 363 aaPredicted RBP18.64■□□□□ 0.57
APP-211ENST00000462267 NECAB3Q96P71 396 aaPredicted RBP18.64■□□□□ 0.57
APP-211ENST00000462267 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.57
APP-211ENST00000462267 MOXD2PA6NHM9 499 aa18.63■□□□□ 0.57
APP-211ENST00000462267 ADAMTS4O75173 837 aa18.63■□□□□ 0.57
APP-211ENST00000462267 GNAI3P08754 354 aa18.63■□□□□ 0.57
APP-211ENST00000462267 DSG3P32926 999 aa18.63■□□□□ 0.57
APP-211ENST00000462267 GUCY1A2P33402 732 aa18.63■□□□□ 0.57
APP-211ENST00000462267 G3BP1Q13283 466 aaKnown RBP eCLIP18.63■□□□□ 0.57
APP-211ENST00000462267 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
APP-211ENST00000462267 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
APP-211ENST00000462267 TINF2Q9BSI4 451 aa18.63■□□□□ 0.57
APP-211ENST00000462267 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
APP-211ENST00000462267 DIS3Q9Y2L1 958 aaKnown RBP18.63■□□□□ 0.57
APP-211ENST00000462267 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
APP-211ENST00000462267 SLC25A27O95847 323 aa18.62■□□□□ 0.57
APP-211ENST00000462267 CYP7A1P22680 504 aa18.62■□□□□ 0.57
APP-211ENST00000462267 SHMT1P34896 483 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms