RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 NUDT12Q9BQG2 462 aa16.42■□□□□ 0.22
PCOLCE-203ENST00000462260 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
PCOLCE-203ENST00000462260 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
PCOLCE-203ENST00000462260 ARHGEF10LQ9HCE6 1279 aa16.42■□□□□ 0.22
PCOLCE-203ENST00000462260 RLFQ13129 1914 aa16.42■□□□□ 0.22
PCOLCE-203ENST00000462260 GREB1LQ9C091 1923 aaPredicted RBP16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 HMGCRP04035 888 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 CYP2B6P20813 491 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 RASA1P20936 1047 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 CCNA1P78396 465 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 COG2Q14746 738 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 MORN1Q5T089 497 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
PCOLCE-203ENST00000462260 MINDY4BA8MYZ0 360 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 SGPL1O95470 568 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 TDO2P48775 406 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 EXOC6Q8TAG9 804 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 TRIB2Q92519 343 aa16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-203ENST00000462260 APPP05067 770 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 CAPN2P17655 700 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 SPICE1Q8N0Z3 855 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 TANGO6Q9C0B7 1094 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
PCOLCE-203ENST00000462260 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 IGHDP01880 384 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 DSG3P32926 999 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 TRIM32Q13049 653 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 MAP3K21Q5TCX8 1036 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 DEFB118Q96PH6 123 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 CRISPLD2Q9H0B8 497 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
PCOLCE-203ENST00000462260 FOXP2O15409 715 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 PTPREP23469 700 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 RGS2P41220 211 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 MB21D1Q8N884 522 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 APBA2Q99767 749 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 GOPCQ9HD26 462 aa16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 HMX1Q9NP08 348 aaPredicted RBP16.37■□□□□ 0.21
PCOLCE-203ENST00000462260 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 SLC15A5A6NIM6 579 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 FLOT1O75955 427 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 CCL14Q16627 93 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 MOV10L1Q9BXT6 1211 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 NAPBQ9H115 298 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 CWC22Q9HCG8 908 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
PCOLCE-203ENST00000462260 PRDM1O75626 825 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 HOXC6P09630 235 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 ZKSCAN1P17029 563 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 NUCB1Q02818 461 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 GRB14Q14449 540 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 SHCBP1Q8NEM2 672 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 ADAMTS5Q9UNA0 930 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
PCOLCE-203ENST00000462260 PDE4BQ07343 736 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 PPARAQ07869 468 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 CACNB2Q08289 660 aaPredicted RBP16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 HELLSQ9NRZ9 838 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
PCOLCE-203ENST00000462260 STRNO43815 780 aa16.33■□□□□ 0.2
PCOLCE-203ENST00000462260 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
PCOLCE-203ENST00000462260 ERCC3P19447 782 aa16.33■□□□□ 0.2
PCOLCE-203ENST00000462260 TMEM132BQ14DG7 1078 aa16.33■□□□□ 0.2
PCOLCE-203ENST00000462260 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
PCOLCE-203ENST00000462260 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms