RNA–Protein interactions for RNA: ENST00000462103.1

MACF1-209, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-209ENST00000462103 ABCB5Q2M3G0 1257 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 APOBEC3FQ8IUX4 373 aaKnown RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 CCDC82Q8N4S0 544 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 PHKBQ93100 1093 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 CCDC17Q96LX7 622 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 KAT14Q9H8E8 782 aa13.36□□□□□ -0.27
MACF1-209ENST00000462103 HERC5Q9UII4 1024 aaKnown RBP13.36□□□□□ -0.27
MACF1-209ENST00000462103 NID2Q14112 1375 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 TOP1P11387 765 aaKnown RBP13.35□□□□□ -0.27
MACF1-209ENST00000462103 SYT1P21579 422 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 NT5C2P49902 561 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 FUT2Q10981 343 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 TNFAIP1Q13829 316 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 AIFM3Q96NN9 605 aa13.35□□□□□ -0.27
MACF1-209ENST00000462103 LLPHQ9BRT6 129 aaKnown RBP13.35□□□□□ -0.27
MACF1-209ENST00000462103 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
MACF1-209ENST00000462103 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 DDAH1O94760 285 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
MACF1-209ENST00000462103 GRM4Q14833 912 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 SRBD1Q8N5C6 995 aaKnown RBP13.34□□□□□ -0.27
MACF1-209ENST00000462103 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
MACF1-209ENST00000462103 SRCAPQ6ZRS2 3230 aa13.34□□□□□ -0.27
MACF1-209ENST00000462103 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 GREB1LQ9C091 1923 aaPredicted RBP13.33□□□□□ -0.28
MACF1-209ENST00000462103 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 CPLX1O14810 134 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 BRD1O95696 1058 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 TTLL1O95922 423 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 INPP5BP32019 993 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 CAP2P40123 477 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 PRKG1Q13976 671 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
MACF1-209ENST00000462103 KIAA1755Q5JYT7 1200 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 TMEM179Q6ZVK1 233 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 USP50Q70EL3 339 aaPredicted RBP13.33□□□□□ -0.28
MACF1-209ENST00000462103 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 NYAP2Q9P242 653 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 ORC3Q9UBD5 711 aaPredicted RBP13.33□□□□□ -0.28
MACF1-209ENST00000462103 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 ZBTB21Q9ULJ3 1066 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
MACF1-209ENST00000462103 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 IFNAR1P17181 557 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 ECE1P42892 770 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 RCAN1P53805 252 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.283e-10■■□□□ 14.4
MACF1-209ENST00000462103 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 TNPO1Q92973 898 aaKnown RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 MKL1Q969V6 931 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 SHISA4Q96DD7 197 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 GLIS2Q9BZE0 524 aaPredicted RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
MACF1-209ENST00000462103 PITPNM2Q9BZ72 1349 aa13.32□□□□□ -0.28
MACF1-209ENST00000462103 PALM3A6NDB9 673 aaPredicted RBP13.31□□□□□ -0.28
MACF1-209ENST00000462103 STX6O43752 255 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 DHX16O60231 1041 aaKnown RBP13.31□□□□□ -0.28
MACF1-209ENST00000462103 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
MACF1-209ENST00000462103 CALM1P0DP23 149 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 CALM2P0DP24 149 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 CALM3P0DP25 149 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 ICA1Q05084 483 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
MACF1-209ENST00000462103 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
MACF1-209ENST00000462103 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
MACF1-209ENST00000462103 CABP5Q9NP86 173 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms