RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ITIH6Q6UXX5 1313 aa20.89■□□□□ 0.94
HPS3-204ENST00000462030 ACTN2P35609 894 aa20.89■□□□□ 0.93
HPS3-204ENST00000462030 NOA1Q8NC60 698 aaKnown RBP20.89■□□□□ 0.93
HPS3-204ENST00000462030 RNF26Q9BY78 433 aaPredicted RBP20.89■□□□□ 0.93
HPS3-204ENST00000462030 TRIM34Q9BYJ4 488 aa20.89■□□□□ 0.93
HPS3-204ENST00000462030 BLZF1Q9H2G9 400 aa20.89■□□□□ 0.93
HPS3-204ENST00000462030 MYH2Q9UKX2 1941 aa20.89■□□□□ 0.93
HPS3-204ENST00000462030 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.88■□□□□ 0.93
HPS3-204ENST00000462030 KRT2P35908 639 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 TUBB2AQ13885 445 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 TUBB2BQ9BVA1 445 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 NACAP1Q9BZK3 213 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 VPS16Q9H269 839 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 XDHP47989 1333 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 CTAGE15A4D2H0 777 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 N4BP3O15049 544 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 CTAGE8P0CG41 777 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 ZNF174Q15697 407 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 CTAGE6Q86UF2 777 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 TMTC1Q8IUR5 882 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 CTAGE4Q8IX94 777 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 TMTC2Q8N394 836 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 PHF20Q9BVI0 1012 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 ANKRD36CQ5JPF3 1778 aa20.88■□□□□ 0.93
HPS3-204ENST00000462030 TNKSO95271 1327 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 TRIM66O15016 1216 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 PDE8AO60658 829 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 CASP8Q14790 479 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 SLF1Q9BQI6 1058 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 TAB2Q9NYJ8 693 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 MYO1CO00159 1063 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 EIF3JO75822 258 aaKnown RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 SLC5A1P13866 664 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 AKAP17AQ02040 695 aaKnown RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 SEC23AQ15436 765 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 WHAMMP3Q1A5X7 153 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 NCAPH2Q6IBW4 605 aa20.87■□□□□ 0.93
HPS3-204ENST00000462030 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 NUP88Q99567 741 aaPredicted RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 CWC15Q9P013 229 aaKnown RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 COL5A2P05997 1499 aaPredicted RBP20.87■□□□□ 0.93
HPS3-204ENST00000462030 LRP5O75197 1615 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 RCAN1P53805 252 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 PPARAQ07869 468 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 LIMA1Q9UHB6 759 aaKnown RBP20.86■□□□□ 0.93
HPS3-204ENST00000462030 MYH13Q9UKX3 1938 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 MROH5Q6ZUA9 1318 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 PLEKHA8P1O95397 391 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 COPB1P53618 953 aaKnown RBP20.86■□□□□ 0.93
HPS3-204ENST00000462030 AMPD2Q01433 879 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 RRAGBQ5VZM2 374 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 FERMT2Q96AC1 680 aa20.86■□□□□ 0.93
HPS3-204ENST00000462030 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 STARD3NLO95772 234 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 GNAT2P19087 354 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 CYP26C1Q6V0L0 522 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 C10orf67Q8IYJ2 551 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
HPS3-204ENST00000462030 IQUBQ8NA54 791 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 SDR42E1Q8WUS8 393 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 PIGBQ92521 554 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 TRIM10Q9UDY6 481 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 XBP1P17861 261 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 FUT2Q10981 343 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 MTA3Q9BTC8 594 aa20.85■□□□□ 0.93
HPS3-204ENST00000462030 RNF41Q9H4P4 317 aaPredicted RBP20.85■□□□□ 0.93
HPS3-204ENST00000462030 V9GY48 417 aaPredicted RBP20.85■□□□□ 0.93
HPS3-204ENST00000462030 LRRIQ3A6PVS8 624 aaPredicted RBP20.84■□□□□ 0.93
HPS3-204ENST00000462030 PHACTR2O75167 634 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 SRLQ86TD4 932 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 CCDC102AQ96A19 550 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 CHP1Q99653 195 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 MTRQ99707 1265 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 MYO6Q9UM54 1294 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 NUP98P52948 1817 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 KRT9P35527 623 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 BCAMP50895 628 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 TUBB4BP68371 445 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 E2F4Q16254 413 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 LEKR1Q6ZMV7 388 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 REXO2Q9Y3B8 237 aaKnown RBP20.84■□□□□ 0.93
HPS3-204ENST00000462030 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
HPS3-204ENST00000462030 PLCH1Q4KWH8 1693 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 LRRC10BA6NIK2 292 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 PTGDRQ13258 359 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 NPY5RQ15761 445 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 TTC38Q5R3I4 469 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 FOXR1Q6PIV2 292 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 ADGRA1Q86SQ6 560 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 ENAHQ8N8S7 591 aaPredicted RBP20.83■□□□□ 0.93
HPS3-204ENST00000462030 MYO1AQ9UBC5 1043 aa20.83■□□□□ 0.93
HPS3-204ENST00000462030 RRP15Q9Y3B9 282 aaKnown RBP20.83■□□□□ 0.93
HPS3-204ENST00000462030 TNFRSF25Q93038 417 aa20.83■□□□□ 0.92
HPS3-204ENST00000462030 RASSF4Q9H2L5 321 aa20.83■□□□□ 0.92
HPS3-204ENST00000462030 RNF216Q9NWF9 866 aaPredicted RBP20.83■□□□□ 0.92
HPS3-204ENST00000462030 KCNJ18B7U540 433 aa20.82■□□□□ 0.92
HPS3-204ENST00000462030 PAK1Q13153 545 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms