RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 GUCY1A2P33402 732 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 SHMT1P34896 483 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 SEPT2Q15019 361 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 LRRC41Q15345 812 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
PABPC4-208ENST00000461578 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
PABPC4-208ENST00000461578 CCDC8Q9H0W5 538 aaPredicted RBP16.77■□□□□ 0.28
PABPC4-208ENST00000461578 SPTBN5Q9NRC6 3674 aaKnown RBP16.76■□□□□ 0.27
PABPC4-208ENST00000461578 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
PABPC4-208ENST00000461578 PLCD1P51178 756 aa16.76■□□□□ 0.27
PABPC4-208ENST00000461578 PLS1Q14651 629 aa16.76■□□□□ 0.27
PABPC4-208ENST00000461578 SNX17Q15036 470 aa16.76■□□□□ 0.27
PABPC4-208ENST00000461578 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
PABPC4-208ENST00000461578 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
PABPC4-208ENST00000461578 SPATC1LQ9H0A9 340 aa16.76■□□□□ 0.27
PABPC4-208ENST00000461578 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
PABPC4-208ENST00000461578 CDH23Q9H251 3354 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 STRNO43815 780 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
PABPC4-208ENST00000461578 ITGB8P26012 769 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 TLE2Q04725 743 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 COG2Q14746 738 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
PABPC4-208ENST00000461578 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
PABPC4-208ENST00000461578 BCAR3O75815 825 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
PABPC4-208ENST00000461578 EPHB4P54760 987 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 EVX2Q03828 476 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 POLA2Q14181 598 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 ANTXR1Q9H6X2 564 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 SLC5A4Q9NY91 659 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 HOXC10Q9NYD6 342 aa16.74■□□□□ 0.27
PABPC4-208ENST00000461578 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 IPO8O15397 1037 aaKnown RBP16.73■□□□□ 0.27
PABPC4-208ENST00000461578 IGSF3O75054 1194 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 CLTBP09497 229 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 SHCBP1Q8NEM2 672 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 SYMPKQ92797 1274 aaKnown RBP16.73■□□□□ 0.27
PABPC4-208ENST00000461578 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
PABPC4-208ENST00000461578 PQBP1O60828 265 aaKnown RBP16.72■□□□□ 0.27
PABPC4-208ENST00000461578 PGK1P00558 417 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 GRIN2CQ14957 1233 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 SSH3Q8TE77 659 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 ATG4CQ96DT6 458 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 MAML3Q96JK9 1138 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 XPNPEP3Q9NQH7 507 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
PABPC4-208ENST00000461578 FLOT1O75955 427 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 RAG1P15918 1043 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 DSG3P32926 999 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 ATP8B2P98198 1209 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 C1orf53Q5VUE5 145 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 SPICE1Q8N0Z3 855 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
PABPC4-208ENST00000461578 MROH8Q9H579 483 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 PHF24Q9UPV7 400 aa16.71■□□□□ 0.27
PABPC4-208ENST00000461578 TMEM265A0A087WTH1 108 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 MAGEB6P1A0A0J9YX57 407 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 RARBP10826 455 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 DNAJB2P25686 324 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 GABPAQ06546 454 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
PABPC4-208ENST00000461578 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
PABPC4-208ENST00000461578 MCM9Q9NXL9 1143 aa16.7■□□□□ 0.26
PABPC4-208ENST00000461578 ZNFX1Q9P2E3 1918 aaKnown RBP16.7■□□□□ 0.26
PABPC4-208ENST00000461578 A0A1W2PQ45 241 aaPredicted RBP16.69■□□□□ 0.26
PABPC4-208ENST00000461578 A0A1W2PQY0 241 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 PGK2P07205 417 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 FCER1AP12319 257 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 TAL1P17542 331 aaPredicted RBP16.69■□□□□ 0.26
PABPC4-208ENST00000461578 COL9A1P20849 921 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 FPGSQ05932 587 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 TJAP1Q5JTD0 557 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 RNF180Q86T96 592 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 TMEM39AQ9NV64 488 aa16.69■□□□□ 0.26
PABPC4-208ENST00000461578 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
PABPC4-208ENST00000461578 CYP2D6P10635 497 aa16.68■□□□□ 0.26
PABPC4-208ENST00000461578 SDR42E1Q8WUS8 393 aa16.68■□□□□ 0.26
PABPC4-208ENST00000461578 MMP19Q99542 508 aa16.68■□□□□ 0.26
PABPC4-208ENST00000461578 COL11A1P12107 1806 aaPredicted RBP16.68■□□□□ 0.26
PABPC4-208ENST00000461578 TTC28Q96AY4 2481 aa16.68■□□□□ 0.26
PABPC4-208ENST00000461578 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.67■□□□□ 0.26
PABPC4-208ENST00000461578 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.67■□□□□ 0.26
PABPC4-208ENST00000461578 TNFRSF10AO00220 468 aa16.67■□□□□ 0.26
PABPC4-208ENST00000461578 TMEM132BQ14DG7 1078 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms