RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 LRRC10BA6NIK2 292 aa7.45□□□□□ -1.22
UBA3-204ENST00000461522 TTC6Q86TZ1 520 aa7.45□□□□□ -1.22
UBA3-204ENST00000461522 UBP1Q9NZI7 540 aa7.45□□□□□ -1.22
UBA3-204ENST00000461522 DUSP13Q9UII6 198 aa7.45□□□□□ -1.22
UBA3-204ENST00000461522 BTBD11A6QL63 1104 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 UBOX5O94941 541 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 MESP2Q0VG99 397 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 LIN37Q96GY3 246 aaPredicted RBP7.44□□□□□ -1.22
UBA3-204ENST00000461522 ADAMTS10Q9H324 1103 aa7.44□□□□□ -1.22
UBA3-204ENST00000461522 GBP1P32455 592 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 EGR3Q06889 387 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 MLANAQ16655 118 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 SEZ6Q53EL9 994 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 CDCP2Q5VXM1 449 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 REXO1Q8N1G1 1221 aaKnown RBP7.43□□□□□ -1.22
UBA3-204ENST00000461522 TMEM87AQ8NBN3 555 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
UBA3-204ENST00000461522 SHISA3A0PJX4 238 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 HPXP02790 462 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 RAG1P15918 1043 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 JAG1P78504 1218 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 APOBRQ0VD83 1088 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 SLITRK4Q8IW52 837 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 FAM84AQ96KN4 292 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
UBA3-204ENST00000461522 RAC2P15153 192 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 LTKP29376 864 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 HK2P52789 917 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 MFAP1P55081 439 aaKnown RBP7.41□□□□□ -1.22
UBA3-204ENST00000461522 ERVFC1P60507 584 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 RNF4P78317 190 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 CLCQ05315 142 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 ABHD4Q8TB40 342 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 ATG4CQ96DT6 458 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 BACH2Q9BYV9 841 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBA3-204ENST00000461522 SP110Q9HB58 689 aa7.41□□□□□ -1.22
UBA3-204ENST00000461522 ZGLP1P0C6A0 271 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 ZNF76P36508 570 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 FANCCQ00597 558 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 FZD5Q13467 585 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 ZNF124Q15973 351 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 PRR23BQ6ZRT6 265 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 GK5Q6ZS86 529 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
UBA3-204ENST00000461522 BHLHE22Q8NFJ8 381 aaPredicted RBP7.4□□□□□ -1.22
UBA3-204ENST00000461522 EAF1Q96JC9 268 aaPredicted RBP7.4□□□□□ -1.22
UBA3-204ENST00000461522 MEIS3P2A8K0S8 358 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 POLR2BP30876 1174 aaKnown RBP7.39□□□□□ -1.23
UBA3-204ENST00000461522 ZNF165P49910 485 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 TEKQ02763 1124 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
UBA3-204ENST00000461522 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
UBA3-204ENST00000461522 MPZL3Q6UWV2 235 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 NLRC3Q7RTR2 1065 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 ENOX1Q8TC92 643 aaKnown RBP7.39□□□□□ -1.23
UBA3-204ENST00000461522 MYLIPQ8WY64 445 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 NKD1Q969G9 470 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 SLC38A3Q99624 504 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 SPON2Q9BUD6 331 aa7.39□□□□□ -1.23
UBA3-204ENST00000461522 METTL5Q9NRN9 209 aaKnown RBP7.39□□□□□ -1.23
UBA3-204ENST00000461522 CCNFP41002 786 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 RAD51AP2Q09MP3 1159 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 CLEC16AQ2KHT3 1053 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 SYTL5Q8TDW5 730 aaPredicted RBP7.38□□□□□ -1.23
UBA3-204ENST00000461522 HDAC8Q9BY41 377 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 ANTXR1Q9H6X2 564 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 ZNF281Q9Y2X9 895 aa7.38□□□□□ -1.23
UBA3-204ENST00000461522 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
UBA3-204ENST00000461522 MCM4P33991 863 aa7.37□□□□□ -1.23
UBA3-204ENST00000461522 PKN1Q16512 942 aa7.37□□□□□ -1.23
UBA3-204ENST00000461522 LRRFIP1Q32MZ4 808 aaKnown RBP7.37□□□□□ -1.23
UBA3-204ENST00000461522 NBPF9Q3BBW0 867 aa7.37□□□□□ -1.23
UBA3-204ENST00000461522 DHX38Q92620 1227 aaKnown RBP7.37□□□□□ -1.23
UBA3-204ENST00000461522 ASCC2Q9H1I8 757 aaPredicted RBP7.37□□□□□ -1.23
UBA3-204ENST00000461522 DBX1A6NMT0 343 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 TNFRSF10CO14798 259 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 TRHRP34981 398 aaPredicted RBP7.36□□□□□ -1.23
UBA3-204ENST00000461522 NR0B2Q15466 257 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 USP48Q86UV5 1035 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 LILRA2Q8N149 483 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 OXR1Q8N573 874 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 DAGLBQ8NCG7 672 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 EBF1Q9UH73 591 aa7.36□□□□□ -1.23
UBA3-204ENST00000461522 FITM1A5D6W6 292 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 CLEC3AO75596 197 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 SNW1Q13573 536 aaKnown RBP7.35□□□□□ -1.23
UBA3-204ENST00000461522 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 RNF111Q6ZNA4 994 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 TMC3Q7Z5M5 1100 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 USHBP1Q8N6Y0 703 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 LINC01599Q8WXQ3 324 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 RNF32Q9H0A6 362 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms