RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 HMGCRP04035 888 aa18.6■□□□□ 0.57
NUP50-213ENST00000461437 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
NUP50-213ENST00000461437 PLEKHH3Q7Z736 793 aa18.6■□□□□ 0.57
NUP50-213ENST00000461437 NUDT12Q9BQG2 462 aa18.6■□□□□ 0.57
NUP50-213ENST00000461437 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.6■□□□□ 0.571e-8■■■■■ 27
NUP50-213ENST00000461437 CWC22Q9HCG8 908 aaKnown RBP18.6■□□□□ 0.57
NUP50-213ENST00000461437 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
NUP50-213ENST00000461437 RABGAP1Q9Y3P9 1069 aa18.6■□□□□ 0.57
NUP50-213ENST00000461437 RAD21O60216 631 aa18.59■□□□□ 0.57
NUP50-213ENST00000461437 GLRX3O76003 335 aaKnown RBP18.59■□□□□ 0.57
NUP50-213ENST00000461437 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
NUP50-213ENST00000461437 EEF2P13639 858 aaKnown RBP18.59■□□□□ 0.57
NUP50-213ENST00000461437 MAPK4P31152 587 aa18.59■□□□□ 0.57
NUP50-213ENST00000461437 NKX2-3Q8TAU0 364 aa18.59■□□□□ 0.57
NUP50-213ENST00000461437 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.59■□□□□ 0.57
NUP50-213ENST00000461437 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
NUP50-213ENST00000461437 PAK6Q9NQU5 681 aaPredicted RBP18.59■□□□□ 0.57
NUP50-213ENST00000461437 ERC2O15083 957 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 PRDM1O75626 825 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 FARP2O94887 1054 aaPredicted RBP18.58■□□□□ 0.56
NUP50-213ENST00000461437 APPP05067 770 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 TDO2P48775 406 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 MORN1Q5T089 497 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 UBE2Q1Q7Z7E8 422 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 DIS3LQ8TF46 1054 aaKnown RBP18.58■□□□□ 0.56
NUP50-213ENST00000461437 GTF3C2Q8WUA4 911 aaPredicted RBP18.58■□□□□ 0.56
NUP50-213ENST00000461437 USP6NLQ92738 828 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 TMX2Q9Y320 296 aa18.58■□□□□ 0.56
NUP50-213ENST00000461437 ZFYP08048 801 aaPredicted RBP18.57■□□□□ 0.56
NUP50-213ENST00000461437 RASA1P20936 1047 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 SOCS4Q8WXH5 440 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 DPF3Q92784 378 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 ATG4CQ96DT6 458 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 VCPKMTQ9H867 229 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 FBXO28Q9NVF7 368 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
NUP50-213ENST00000461437 H0YGN5 161 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 FLOT1O75955 427 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 PRKAR2AP13861 404 aaKnown RBP18.56■□□□□ 0.56
NUP50-213ENST00000461437 ZKSCAN1P17029 563 aaPredicted RBP18.56■□□□□ 0.56
NUP50-213ENST00000461437 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
NUP50-213ENST00000461437 COG2Q14746 738 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 ZMYM1Q5SVZ6 1142 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 LBX2Q6XYB7 198 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 IFNL3Q8IZI9 196 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
NUP50-213ENST00000461437 ROBO3Q96MS0 1386 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 PLXNA1Q9UIW2 1896 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 CCND3P30281 292 aaPredicted RBP18.55■□□□□ 0.56
NUP50-213ENST00000461437 DSG3P32926 999 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 RGS2P41220 211 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 PLS1Q14651 629 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 NPLOC4Q8TAT6 608 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 NUP88Q99567 741 aaPredicted RBP18.55■□□□□ 0.56
NUP50-213ENST00000461437 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
NUP50-213ENST00000461437 CRISPLD2Q9H0B8 497 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 MKNK2Q9HBH9 465 aa18.55■□□□□ 0.56
NUP50-213ENST00000461437 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
NUP50-213ENST00000461437 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
NUP50-213ENST00000461437 RPTORQ8N122 1335 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
NUP50-213ENST00000461437 IGHDP01880 384 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 PTPREP23469 700 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 PDE1AP54750 535 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 CCNA1P78396 465 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 CACNB2Q08289 660 aaPredicted RBP18.54■□□□□ 0.56
NUP50-213ENST00000461437 HABP4Q5JVS0 413 aaKnown RBP18.54■□□□□ 0.56
NUP50-213ENST00000461437 FAM83BQ5T0W9 1011 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
NUP50-213ENST00000461437 APBA2Q99767 749 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
NUP50-213ENST00000461437 FOXP2O15409 715 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 MAP3K21Q5TCX8 1036 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 VPS53Q5VIR6 699 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 GIMAP6Q6P9H5 292 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 LPAR1Q92633 364 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 SPATC1LQ9H0A9 340 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 INCENPQ9NQS7 918 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
NUP50-213ENST00000461437 WDR46O15213 610 aaKnown RBP18.52■□□□□ 0.56
NUP50-213ENST00000461437 XRCC5P13010 732 aaKnown RBP18.52■□□□□ 0.56
NUP50-213ENST00000461437 GNAT2P19087 354 aa18.52■□□□□ 0.56
NUP50-213ENST00000461437 ERCC3P19447 782 aa18.52■□□□□ 0.56
NUP50-213ENST00000461437 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.56
NUP50-213ENST00000461437 SH2D4AQ9H788 454 aa18.52■□□□□ 0.56
NUP50-213ENST00000461437 HOXC10Q9NYD6 342 aa18.52■□□□□ 0.56
NUP50-213ENST00000461437 COLQQ9Y215 455 aaPredicted RBP18.52■□□□□ 0.56
NUP50-213ENST00000461437 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
NUP50-213ENST00000461437 CTDSPL2Q05D32 466 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 GRB14Q14449 540 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 TMEM132BQ14DG7 1078 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 NCAPG2Q86XI2 1143 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 LRRC47Q8N1G4 583 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms