RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-220ENST00000461409 TLR7Q9NYK1 1049 aaKnown RBP10.58□□□□□ -0.72
HDAC9-220ENST00000461409 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 GABRQQ9UN88 632 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 ADGRG1Q9Y653 693 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 PTPRFP10586 1907 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 HMMRO75330 724 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 USP5P45974 858 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 BACE1P56817 501 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-220ENST00000461409 MTMR2Q13614 643 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
HDAC9-220ENST00000461409 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-220ENST00000461409 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
HDAC9-220ENST00000461409 PALD1Q9ULE6 856 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 EXOC6BQ9Y2D4 811 aa10.57□□□□□ -0.72
HDAC9-220ENST00000461409 CEP290O15078 2479 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 INHAP05111 366 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 HIC1Q14526 733 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 RRP1BQ14684 758 aaKnown RBP10.56□□□□□ -0.72
HDAC9-220ENST00000461409 TTF1Q15361 905 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-220ENST00000461409 MAGEB6Q8N7X4 407 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 MIGA1Q8NAN2 632 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 HTATIP2Q9BUP3 242 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
HDAC9-220ENST00000461409 DNAJC18Q9H819 358 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 ZBTB21Q9ULJ3 1066 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 LOC285556D6RIA3 1793 aa10.56□□□□□ -0.72
HDAC9-220ENST00000461409 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 FARP2O94887 1054 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 ELNP15502 786 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 HOXA7P31268 230 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 DYNLL1P63167 89 aaKnown RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 RPAP2Q8IXW5 612 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 CLASRPQ8N2M8 674 aaKnown RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 RHPN1Q8TCX5 695 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 U2AF1L4Q8WU68 220 aaKnown RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-220ENST00000461409 DPF3Q92784 378 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 KIF1BPQ96EK5 621 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 EHD4Q9H223 541 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 SERPINB13Q9UIV8 391 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 DDX19BQ9UMR2 479 aa10.55□□□□□ -0.72
HDAC9-220ENST00000461409 H0YGN5 161 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 MGAMO43451 1857 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 GDF11O95390 407 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 SGPL1O95470 568 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 HMGCRP04035 888 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
HDAC9-220ENST00000461409 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 FEZ1Q99689 392 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 IL1RAPL2Q9NP60 686 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 PAK6Q9NQU5 681 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-220ENST00000461409 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
HDAC9-220ENST00000461409 RAB11FIP3O75154 756 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 GH2P01242 217 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 TFRCP02786 760 aaKnown RBP10.53□□□□□ -0.72
HDAC9-220ENST00000461409 HERVK_113P62684 666 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 JAG1P78504 1218 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 SLC9C2Q5TAH2 1124 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 TATDN1Q6P1N9 297 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
HDAC9-220ENST00000461409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
HDAC9-220ENST00000461409 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 DEFB118Q96PH6 123 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 CRNKL1Q9BZJ0 848 aaKnown RBP10.53□□□□□ -0.72
HDAC9-220ENST00000461409 ANTXR1Q9H6X2 564 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 NR2E3Q9Y5X4 410 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
HDAC9-220ENST00000461409 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 APBB1O00213 710 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 PDE6AP16499 860 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 MAPK4P31152 587 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 USP14P54578 494 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 ABCB5Q2M3G0 1257 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 CERKLQ49MI3 558 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-220ENST00000461409 TRMT44Q8IYL2 757 aaKnown RBP10.52□□□□□ -0.73
HDAC9-220ENST00000461409 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 P2RX7Q99572 595 aaKnown RBP10.52□□□□□ -0.73
HDAC9-220ENST00000461409 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDAC9-220ENST00000461409 CABP5Q9NP86 173 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 COG6Q9Y2V7 657 aa10.52□□□□□ -0.73
HDAC9-220ENST00000461409 CDK5RAP2Q96SN8 1893 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms