RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 CTDSPL2Q05D32 466 aa24.34■■□□□ 1.49
SCAF8-204ENST00000461219 CATSPERGQ6ZRH7 1159 aa24.34■■□□□ 1.49
SCAF8-204ENST00000461219 ZNF589Q86UQ0 364 aaPredicted RBP24.34■■□□□ 1.49
SCAF8-204ENST00000461219 SPICE1Q8N0Z3 855 aa24.34■■□□□ 1.49
SCAF8-204ENST00000461219 VCPKMTQ9H867 229 aa24.34■■□□□ 1.49
SCAF8-204ENST00000461219 TMX2Q9Y320 296 aa24.34■■□□□ 1.49
SCAF8-204ENST00000461219 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
SCAF8-204ENST00000461219 SOX10P56693 466 aa24.33■■□□□ 1.49
SCAF8-204ENST00000461219 ALX1Q15699 326 aa24.33■■□□□ 1.49
SCAF8-204ENST00000461219 BIN2Q9UBW5 565 aaPredicted RBP24.33■■□□□ 1.49
SCAF8-204ENST00000461219 TSPY2A6NKD2 308 aa24.32■■□□□ 1.48
SCAF8-204ENST00000461219 CTGFP29279 349 aa24.32■■□□□ 1.48
SCAF8-204ENST00000461219 TFAP4Q01664 338 aa24.32■■□□□ 1.48
SCAF8-204ENST00000461219 RUFY2Q8WXA3 655 aa24.32■■□□□ 1.48
SCAF8-204ENST00000461219 CCDC136Q96JN2 1154 aa24.32■■□□□ 1.48
SCAF8-204ENST00000461219 LAMA4Q16363 1823 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 WDR46O15213 610 aaKnown RBP24.31■■□□□ 1.48
SCAF8-204ENST00000461219 RANBP6O60518 1105 aaKnown RBP24.31■■□□□ 1.48
SCAF8-204ENST00000461219 FGAP02671 866 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 CCNA1P78396 465 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 PRKCZQ05513 592 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 FAM47AQ5JRC9 791 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 PPP4R3BQ5MIZ7 849 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 HOXC10Q9NYD6 342 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 MORF4L1Q9UBU8 362 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 CLIP2Q9UDT6 1046 aa24.31■■□□□ 1.48
SCAF8-204ENST00000461219 FLOT1O75955 427 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 GSPT1P15170 499 aaKnown RBP24.3■■□□□ 1.48
SCAF8-204ENST00000461219 ERVK-9P63128 1117 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 ERVK-24P63145 666 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 COG2Q14746 738 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 RRP12Q5JTH9 1297 aaKnown RBP24.3■■□□□ 1.48
SCAF8-204ENST00000461219 WDR78Q5VTH9 848 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 NYAP2Q9P242 653 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 ISY1Q9ULR0 285 aaKnown RBP24.3■■□□□ 1.48
SCAF8-204ENST00000461219 RABGAP1Q9Y3P9 1069 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 PARP14Q460N5 1801 aa24.3■■□□□ 1.48
SCAF8-204ENST00000461219 COL11A1P12107 1806 aaPredicted RBP24.29■■□□□ 1.48
SCAF8-204ENST00000461219 FOXP2O15409 715 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 TTLL1O95922 423 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 MYCP01106 439 aaPredicted RBP24.29■■□□□ 1.48
SCAF8-204ENST00000461219 HAND2P61296 217 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 SIAH1Q8IUQ4 282 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 TMEM106CQ9BVX2 250 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 ZMYM6O95789 1325 aa24.29■■□□□ 1.48
SCAF8-204ENST00000461219 MAPK4P31152 587 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 GRK4P32298 578 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 FLT3LGP49771 235 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 NEDD1Q8NHV4 660 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 SH3TC2Q8TF17 1288 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 CEP95Q96GE4 821 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 TXNRD2Q9NNW7 524 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 RBPJLQ9UBG7 517 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 ANAPC4Q9UJX5 808 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 GABRQQ9UN88 632 aa24.28■■□□□ 1.48
SCAF8-204ENST00000461219 ZNF213O14771 459 aa24.27■■□□□ 1.48
SCAF8-204ENST00000461219 PEX10O60683 326 aa24.27■■□□□ 1.48
SCAF8-204ENST00000461219 MFSD6Q6ZSS7 791 aa24.27■■□□□ 1.48
SCAF8-204ENST00000461219 ARMC5Q96C12 935 aa24.27■■□□□ 1.48
SCAF8-204ENST00000461219 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.27■■□□□ 1.48
SCAF8-204ENST00000461219 MTMR4Q9NYA4 1195 aa24.27■■□□□ 1.48
SCAF8-204ENST00000461219 SPDYE16A6NNV3 312 aaPredicted RBP24.26■■□□□ 1.47
SCAF8-204ENST00000461219 UBXN2AP68543 259 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 PLS1Q14651 629 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 KIAA1755Q5JYT7 1200 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 SLAIN1Q8ND83 568 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 RNF41Q9H4P4 317 aaPredicted RBP24.26■■□□□ 1.47
SCAF8-204ENST00000461219 CTNNA3Q9UI47 895 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 STX8Q9UNK0 236 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 PLIN4Q96Q06 1357 aa24.26■■□□□ 1.47
SCAF8-204ENST00000461219 RLFQ13129 1914 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 ADCY3O60266 1144 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 FAM83BQ5T0W9 1011 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 LRRC47Q8N1G4 583 aaKnown RBP24.25■■□□□ 1.47
SCAF8-204ENST00000461219 INCENPQ9NQS7 918 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.25■■□□□ 1.477e-6■■□□□ 13.7
SCAF8-204ENST00000461219 CTDP1Q9Y5B0 961 aaPredicted RBP24.25■■□□□ 1.47
SCAF8-204ENST00000461219 IVNS1ABPQ9Y6Y0 642 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 PLXNB2O15031 1838 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 RAD50Q92878 1312 aa24.25■■□□□ 1.47
SCAF8-204ENST00000461219 RBBP6Q7Z6E9 1792 aaKnown RBP24.24■■□□□ 1.47
SCAF8-204ENST00000461219 ORC4O43929 436 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 IMMTQ16891 758 aaKnown RBP24.24■■□□□ 1.47
SCAF8-204ENST00000461219 Q3C1V9 767 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 LBX2Q6XYB7 198 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 MB21D1Q8N884 522 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 NUDT12Q9BQG2 462 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 DSCC1Q9BVC3 393 aa24.24■■□□□ 1.47
SCAF8-204ENST00000461219 IGKV6D-41A0A0C4DH26 115 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 F5H6K3 240 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 PCP11498 1178 aaKnown RBP24.23■■□□□ 1.47
SCAF8-204ENST00000461219 DSG3P32926 999 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 KLRC3Q07444 240 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 AKNAD1Q5T1N1 836 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 PLEKHH3Q7Z736 793 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 SOCS4Q8WXH5 440 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 A0A0G2JMZ2 1700 aa24.23■■□□□ 1.47
SCAF8-204ENST00000461219 NDUFB10O96000 172 aa24.22■■□□□ 1.47
SCAF8-204ENST00000461219 CHMLP26374 656 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms