RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ACER1Q8TDN7 264 aa21.02■□□□□ 0.96
TOP3A-202ENST00000461127 MOV10L1Q9BXT6 1211 aaKnown RBP21.02■□□□□ 0.96
TOP3A-202ENST00000461127 CYP2E1P05181 493 aaPredicted RBP21.01■□□□□ 0.95
TOP3A-202ENST00000461127 CT47B1P0C2W7 299 aaPredicted RBP21.01■□□□□ 0.95
TOP3A-202ENST00000461127 DNAJB2P25686 324 aa21.01■□□□□ 0.95
TOP3A-202ENST00000461127 DYNLL1P63167 89 aaKnown RBP21.01■□□□□ 0.95
TOP3A-202ENST00000461127 COG2Q14746 738 aa21.01■□□□□ 0.95
TOP3A-202ENST00000461127 TTC6Q86TZ1 520 aa21.01■□□□□ 0.95
TOP3A-202ENST00000461127 USP38Q8NB14 1042 aa21.01■□□□□ 0.95
TOP3A-202ENST00000461127 SPATC1LQ9H0A9 340 aa21.01■□□□□ 0.95
TOP3A-202ENST00000461127 ERCC3P19447 782 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 CYP7A1P22680 504 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 FPGSQ05932 587 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 FAM47AQ5JRC9 791 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 ZNF576Q9H609 170 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 PHF24Q9UPV7 400 aa21■□□□□ 0.95
TOP3A-202ENST00000461127 KIAA0355O15063 1070 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 COBLO75128 1261 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 RARBP10826 455 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 PRAMEF19Q5SWL8 479 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 RNF180Q86T96 592 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 ABRAQ8N0Z2 381 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 MB21D1Q8N884 522 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 GAS2L1Q99501 681 aaPredicted RBP20.99■□□□□ 0.95
TOP3A-202ENST00000461127 TANGO6Q9C0B7 1094 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 MROH8Q9H579 483 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 TMEM39AQ9NV64 488 aa20.99■□□□□ 0.95
TOP3A-202ENST00000461127 ITGB8P26012 769 aa20.98■□□□□ 0.95
TOP3A-202ENST00000461127 EPHB4P54760 987 aa20.98■□□□□ 0.95
TOP3A-202ENST00000461127 ATXN2LQ8WWM7 1075 aaKnown RBP20.98■□□□□ 0.95
TOP3A-202ENST00000461127 GPR108Q9NPR9 543 aa20.98■□□□□ 0.95
TOP3A-202ENST00000461127 XPNPEP3Q9NQH7 507 aa20.98■□□□□ 0.95
TOP3A-202ENST00000461127 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
TOP3A-202ENST00000461127 PQBP1O60828 265 aaKnown RBP20.97■□□□□ 0.95
TOP3A-202ENST00000461127 GNAI2P04899 355 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 PLS1Q14651 629 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 NCAPG2Q86XI2 1143 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 MIGA1Q8NAN2 632 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 TIFAQ96CG3 184 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 MAML3Q96JK9 1138 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 NCOR1O75376 2440 aa20.97■□□□□ 0.95
TOP3A-202ENST00000461127 IDH1O75874 414 aaKnown RBP20.96■□□□□ 0.95
TOP3A-202ENST00000461127 FCER1AP12319 257 aa20.96■□□□□ 0.95
TOP3A-202ENST00000461127 ZAP70P43403 619 aa20.96■□□□□ 0.95
TOP3A-202ENST00000461127 OS9Q13438 667 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-202ENST00000461127 TNNI3KQ59H18 835 aa20.96■□□□□ 0.95
TOP3A-202ENST00000461127 ZNF512BQ96KM6 892 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-202ENST00000461127 DBNDD2Q9BQY9 259 aa20.96■□□□□ 0.95
TOP3A-202ENST00000461127 FPGT-TNNI3KV9GXZ4 949 aa20.96■□□□□ 0.95
TOP3A-202ENST00000461127 MYO5AQ9Y4I1 1855 aaKnown RBP20.96■□□□□ 0.95
TOP3A-202ENST00000461127 SMCHD1A6NHR9 2005 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 MYO9BQ13459 2157 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
TOP3A-202ENST00000461127 CCDC174Q6PII3 467 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 PPM1EQ8WY54 764 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 ARHGAP45Q92619 1136 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 PIH1D3Q9NQM4 214 aaKnown RBP20.95■□□□□ 0.94
TOP3A-202ENST00000461127 THEGQ9P2T0 379 aa20.95■□□□□ 0.94
TOP3A-202ENST00000461127 PNMA6EA0A0J9YXQ4 647 aa20.94■□□□□ 0.94
TOP3A-202ENST00000461127 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-202ENST00000461127 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
TOP3A-202ENST00000461127 MPHOSPH10O00566 681 aaKnown RBP20.94■□□□□ 0.94
TOP3A-202ENST00000461127 SHMT1P34896 483 aa20.94■□□□□ 0.94
TOP3A-202ENST00000461127 SEPT2Q15019 361 aa20.94■□□□□ 0.94
TOP3A-202ENST00000461127 CDCA7LQ96GN5 454 aa20.94■□□□□ 0.94
TOP3A-202ENST00000461127 PGK1P00558 417 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 POLR3DP05423 398 aaPredicted RBP20.93■□□□□ 0.94
TOP3A-202ENST00000461127 PLA2G5P39877 138 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 AKNAD1Q5T1N1 836 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 CCDC129Q6ZRS4 1044 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 SLC44A5Q8NCS7 719 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 FAM122AQ96E09 287 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 TOX2Q96NM4 488 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 ASB2Q96Q27 587 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 RAPGEFL1Q9UHV5 662 aa20.93■□□□□ 0.94
TOP3A-202ENST00000461127 FLOT1O75955 427 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 DSG3P32926 999 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 GUCY1A2P33402 732 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 TMED8Q6PL24 325 aaPredicted RBP20.92■□□□□ 0.94
TOP3A-202ENST00000461127 ANKRD33Q7Z3H0 272 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 MAGEB6Q8N7X4 407 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 ADAMTS19Q8TE59 1207 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 NUP133Q8WUM0 1156 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 A0A0G2JMZ2 1700 aa20.92■□□□□ 0.94
TOP3A-202ENST00000461127 SLC25A27O95847 323 aa20.91■□□□□ 0.94
TOP3A-202ENST00000461127 PLCD1P51178 756 aa20.91■□□□□ 0.94
TOP3A-202ENST00000461127 MRPS5P82675 430 aaKnown RBP20.91■□□□□ 0.94
TOP3A-202ENST00000461127 FAAP100Q0VG06 881 aa20.91■□□□□ 0.94
TOP3A-202ENST00000461127 TINF2Q9BSI4 451 aa20.91■□□□□ 0.94
TOP3A-202ENST00000461127 TSEN34Q9BSV6 310 aaKnown RBP20.91■□□□□ 0.94
TOP3A-202ENST00000461127 STARD7Q9NQZ5 370 aa20.91■□□□□ 0.94
TOP3A-202ENST00000461127 ZNFX1Q9P2E3 1918 aaKnown RBP20.91■□□□□ 0.94
TOP3A-202ENST00000461127 ROBO3Q96MS0 1386 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 A0A1W2PRG0 241 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 TIMP1P01033 207 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 AKR1A1P14550 325 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 PPIGQ13427 754 aaKnown RBP eCLIP20.9■□□□□ 0.946e-7■■■■□ 20.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms