RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 LPAR1Q92633 364 aa23.76■■□□□ 1.39
SNAPC3-204ENST00000461041 MTMR4Q9NYA4 1195 aa23.76■■□□□ 1.39
SNAPC3-204ENST00000461041 HERVK_113P62684 666 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 PTH1RQ03431 593 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 KIF22Q14807 665 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 IMMTQ16891 758 aaKnown RBP23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 RRP12Q5JTH9 1297 aaKnown RBP23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 CATSPERGQ6ZRH7 1159 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 MFSD6Q6ZSS7 791 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 OTOP1Q7RTM1 612 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 SPICE1Q8N0Z3 855 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 ANKRD13CQ8N6S4 541 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 ARHGAP39Q9C0H5 1083 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 CLIP2Q9UDT6 1046 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 TRIM17Q9Y577 477 aa23.75■■□□□ 1.39
SNAPC3-204ENST00000461041 PCP11498 1178 aaKnown RBP23.74■■□□□ 1.39
SNAPC3-204ENST00000461041 RNF41Q9H4P4 317 aaPredicted RBP23.74■■□□□ 1.39
SNAPC3-204ENST00000461041 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
SNAPC3-204ENST00000461041 GOPCQ9HD26 462 aa23.74■■□□□ 1.39
SNAPC3-204ENST00000461041 ZSWIM8A7E2V4 1837 aa23.74■■□□□ 1.39
SNAPC3-204ENST00000461041 ECM2O94769 699 aaPredicted RBP23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 TTLL1O95922 423 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 ARHGEF6Q15052 776 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 PKN2Q16513 984 aaKnown RBP23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 FAM110CQ1W6H9 321 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 MKL1Q969V6 931 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 ESYT1Q9BSJ8 1104 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 IL17RBQ9NRM6 502 aa23.73■■□□□ 1.39
SNAPC3-204ENST00000461041 WDR46O15213 610 aaKnown RBP23.72■■□□□ 1.39
SNAPC3-204ENST00000461041 CTGFP29279 349 aa23.72■■□□□ 1.39
SNAPC3-204ENST00000461041 TANGO6Q9C0B7 1094 aa23.72■■□□□ 1.39
SNAPC3-204ENST00000461041 NEDD4P46934 1319 aa23.72■■□□□ 1.39
SNAPC3-204ENST00000461041 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
SNAPC3-204ENST00000461041 RAD21O60216 631 aa23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 NMT2O60551 498 aa23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 PSMC4P43686 418 aa23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 PPP4R3BQ5MIZ7 849 aa23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 GTF3C2Q8WUA4 911 aaPredicted RBP23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 MORF4L1Q9UBU8 362 aa23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
SNAPC3-204ENST00000461041 F5H6K3 240 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 CDC45O75419 566 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 KLRC3Q07444 240 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 POTEEQ6S8J3 1075 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 KIAA1211Q6ZU35 1233 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 LRRC47Q8N1G4 583 aaKnown RBP23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 NKX2-3Q8TAU0 364 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 TRIM47Q96LD4 638 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 TXNRD2Q9NNW7 524 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 RBPJLQ9UBG7 517 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 SYNPO2Q9UMS6 1093 aa23.7■■□□□ 1.38
SNAPC3-204ENST00000461041 PEX10O60683 326 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 COG2Q14746 738 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 FBXO46Q6PJ61 603 aaPredicted RBP23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 ESR2Q92731 530 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 MAP4K1Q92918 833 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 STX8Q9UNK0 236 aa23.69■■□□□ 1.38
SNAPC3-204ENST00000461041 SPDYE16A6NNV3 312 aaPredicted RBP23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 FMNL1O95466 1100 aaPredicted RBP23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 NDUFB10O96000 172 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 GNRH1P01148 92 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 FCGRTP55899 365 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 FAM83BQ5T0W9 1011 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 CASC1Q6TDU7 716 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 ABHD8Q96I13 439 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 PAGR1Q9BTK6 254 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 LSG1Q9H089 658 aaKnown RBP23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 TCP11L1Q9NUJ3 509 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 PTPN22Q9Y2R2 807 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 MGAMO43451 1857 aa23.68■■□□□ 1.38
SNAPC3-204ENST00000461041 FLOT1O75955 427 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 CYP21A2P08686 494 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 NOVP48745 357 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 NT5C2P49902 561 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 GMCL1P1Q8NEA9 526 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 NUP88Q99567 741 aaPredicted RBP23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 HOXC10Q9NYD6 342 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 RABGAP1Q9Y3P9 1069 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 RBM8AQ9Y5S9 174 aaKnown RBP23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 RLFQ13129 1914 aa23.67■■□□□ 1.38
SNAPC3-204ENST00000461041 B4E1Z4 1266 aa23.66■■□□□ 1.38
SNAPC3-204ENST00000461041 KDM4AO75164 1064 aa23.66■■□□□ 1.38
SNAPC3-204ENST00000461041 CNMDO75829 334 aa23.66■■□□□ 1.38
SNAPC3-204ENST00000461041 ERVK-9P63128 1117 aa23.66■■□□□ 1.38
SNAPC3-204ENST00000461041 ERVK-24P63145 666 aa23.66■■□□□ 1.38
SNAPC3-204ENST00000461041 MYPNQ86TC9 1320 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 DSG3P32926 999 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 Q3C1V9 767 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 SLFN13Q68D06 897 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 KRT23Q9C075 422 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 CNNM2Q9H8M5 875 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 ANO2Q9NQ90 1003 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 FBXO28Q9NVF7 368 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 SRRDQ9UH36 339 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 PARP14Q460N5 1801 aa23.65■■□□□ 1.38
SNAPC3-204ENST00000461041 TNPO2O14787 897 aaKnown RBP23.64■■□□□ 1.37
SNAPC3-204ENST00000461041 HOXD10P28358 340 aa23.64■■□□□ 1.37
SNAPC3-204ENST00000461041 SAMD1Q6SPF0 538 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms