RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 INCENPQ9NQS7 918 aa21.77■■□□□ 1.08
DDR1-241ENST00000460944 RAD21O60216 631 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 TTLL1O95922 423 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 NT5C2P49902 561 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 PTH1RQ03431 593 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 KIF22Q14807 665 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 NBPF3Q9H094 633 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 MTMR4Q9NYA4 1195 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 CLIP2Q9UDT6 1046 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 TACC3Q9Y6A5 838 aa21.76■■□□□ 1.07
DDR1-241ENST00000460944 GCLCP48506 637 aaPredicted RBP21.75■■□□□ 1.07
DDR1-241ENST00000460944 CTU1Q7Z7A3 348 aaKnown RBP21.75■■□□□ 1.07
DDR1-241ENST00000460944 CD99L2Q8TCZ2 262 aa21.75■■□□□ 1.07
DDR1-241ENST00000460944 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
DDR1-241ENST00000460944 ESR2Q92731 530 aa21.75■■□□□ 1.07
DDR1-241ENST00000460944 RPAP3Q9H6T3 665 aaPredicted RBP21.75■■□□□ 1.07
DDR1-241ENST00000460944 SPICE1Q8N0Z3 855 aa21.74■■□□□ 1.07
DDR1-241ENST00000460944 TANGO6Q9C0B7 1094 aa21.74■■□□□ 1.07
DDR1-241ENST00000460944 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
DDR1-241ENST00000460944 SYNPO2Q9UMS6 1093 aa21.74■■□□□ 1.07
DDR1-241ENST00000460944 STX8Q9UNK0 236 aa21.74■■□□□ 1.07
DDR1-241ENST00000460944 WDR46O15213 610 aaKnown RBP21.73■■□□□ 1.07
DDR1-241ENST00000460944 BCRP11274 1271 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 HERVK_113P62684 666 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 CATSPERGQ6ZRH7 1159 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 MAP4K1Q92918 833 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 CNNM2Q9H8M5 875 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 NEDD4P46934 1319 aa21.73■■□□□ 1.07
DDR1-241ENST00000460944 LACTBP83111 547 aaPredicted RBP21.72■■□□□ 1.07
DDR1-241ENST00000460944 FAM110CQ1W6H9 321 aa21.72■■□□□ 1.07
DDR1-241ENST00000460944 TNS4Q8IZW8 715 aa21.72■■□□□ 1.07
DDR1-241ENST00000460944 LRRC47Q8N1G4 583 aaKnown RBP21.72■■□□□ 1.07
DDR1-241ENST00000460944 ANKRD13CQ8N6S4 541 aa21.72■■□□□ 1.07
DDR1-241ENST00000460944 P2RX7Q99572 595 aaKnown RBP21.72■■□□□ 1.07
DDR1-241ENST00000460944 KRT23Q9C075 422 aa21.72■■□□□ 1.07
DDR1-241ENST00000460944 RBM8AQ9Y5S9 174 aaKnown RBP21.72■■□□□ 1.07
DDR1-241ENST00000460944 TRDNQ13061 729 aa21.71■■□□□ 1.07
DDR1-241ENST00000460944 KIAA1755Q5JYT7 1200 aa21.71■■□□□ 1.07
DDR1-241ENST00000460944 MKL1Q969V6 931 aa21.71■■□□□ 1.07
DDR1-241ENST00000460944 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
DDR1-241ENST00000460944 EFCC1Q9HA90 598 aa21.71■■□□□ 1.07
DDR1-241ENST00000460944 TRIM17Q9Y577 477 aa21.71■■□□□ 1.07
DDR1-241ENST00000460944 F5H6K3 240 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 NMT2O60551 498 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 CYP21A2P08686 494 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 KLRC3Q07444 240 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
DDR1-241ENST00000460944 IQCA1Q86XH1 822 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 TCP11L1Q9NUJ3 509 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 MGAMO43451 1857 aa21.7■■□□□ 1.06
DDR1-241ENST00000460944 B4E1Z4 1266 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 KDM4AO75164 1064 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 FLOT1O75955 427 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 NDUFB10O96000 172 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 COG2Q14746 738 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 CCDC178Q5BJE1 867 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 FAM83BQ5T0W9 1011 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 GMCL1P1Q8NEA9 526 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 IL17RBQ9NRM6 502 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 HOXC10Q9NYD6 342 aa21.69■■□□□ 1.06
DDR1-241ENST00000460944 ECM2O94769 699 aaPredicted RBP21.68■■□□□ 1.06
DDR1-241ENST00000460944 FMNL1O95466 1100 aaPredicted RBP21.68■■□□□ 1.06
DDR1-241ENST00000460944 PSMC4P43686 418 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 FCGRTP55899 365 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 OTOP1Q7RTM1 612 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 PAGR1Q9BTK6 254 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 MCOLN1Q9GZU1 580 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 MORF4L1Q9UBU8 362 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 ISY1Q9ULR0 285 aaKnown RBP21.68■■□□□ 1.06
DDR1-241ENST00000460944 ZSWIM8A7E2V4 1837 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 PARP14Q460N5 1801 aa21.68■■□□□ 1.06
DDR1-241ENST00000460944 MYPNQ86TC9 1320 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 SPDYE16A6NNV3 312 aaPredicted RBP21.67■■□□□ 1.06
DDR1-241ENST00000460944 GNRH1P01148 92 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 SLFN13Q68D06 897 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 SAMD1Q6SPF0 538 aaPredicted RBP21.67■■□□□ 1.06
DDR1-241ENST00000460944 LBX2Q6XYB7 198 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 RALYLQ86SE5 291 aaKnown RBP21.67■■□□□ 1.06
DDR1-241ENST00000460944 GPRC5AQ8NFJ5 357 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 ARHGAP39Q9C0H5 1083 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 RLFQ13129 1914 aa21.67■■□□□ 1.06
DDR1-241ENST00000460944 TOP1P11387 765 aaKnown RBP21.66■■□□□ 1.06
DDR1-241ENST00000460944 HOXD10P28358 340 aa21.66■■□□□ 1.06
DDR1-241ENST00000460944 DSG3P32926 999 aa21.66■■□□□ 1.06
DDR1-241ENST00000460944 NOVP48745 357 aa21.66■■□□□ 1.06
DDR1-241ENST00000460944 TTC14Q96N46 770 aa21.66■■□□□ 1.06
DDR1-241ENST00000460944 UBAC1Q9BSL1 405 aa21.66■■□□□ 1.06
DDR1-241ENST00000460944 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 ERVK-24P63145 666 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 RNF20Q5VTR2 975 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 FBXO46Q6PJ61 603 aaPredicted RBP21.65■■□□□ 1.06
DDR1-241ENST00000460944 CCAR1Q8IX12 1150 aaKnown RBP21.65■■□□□ 1.06
DDR1-241ENST00000460944 NCOA7Q8NI08 942 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 NUP88Q99567 741 aaPredicted RBP21.65■■□□□ 1.06
DDR1-241ENST00000460944 ZKSCAN3Q9BRR0 538 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 TXNRD2Q9NNW7 524 aa21.65■■□□□ 1.06
DDR1-241ENST00000460944 RBPJLQ9UBG7 517 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms