RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
CSDC2-202ENST00000460790 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 FDPSP14324 419 aaKnown RBP12.69□□□□□ -0.38
CSDC2-202ENST00000460790 INPP5BP32019 993 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 GNAQP50148 359 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 ATP2B2Q01814 1243 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 NBPF11Q86T75 865 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
CSDC2-202ENST00000460790 MAD2L2Q9UI95 211 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 DOCK1Q14185 1865 aa12.69□□□□□ -0.38
CSDC2-202ENST00000460790 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 PPP1R12BO60237 982 aaPredicted RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 PDHBP11177 359 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 SSRP1Q08945 709 aaKnown RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 FUT2Q10981 343 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 GMCL1P1Q8NEA9 526 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 GLIS2Q9BZE0 524 aaPredicted RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 ORC3Q9UBD5 711 aaPredicted RBP12.68□□□□□ -0.38
CSDC2-202ENST00000460790 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
CSDC2-202ENST00000460790 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 F5H6K3 240 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PDCP20941 246 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 SYT1P21579 422 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 NF2P35240 595 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 NUCB2P80303 420 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 KLRC3Q07444 240 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 MAP1SQ66K74 1059 aaPredicted RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 FAM184AQ8NB25 1140 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PHKBQ93100 1093 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
CSDC2-202ENST00000460790 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 KIF3AQ9Y496 699 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
CSDC2-202ENST00000460790 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 ECE1P42892 770 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 PRKG1Q13976 671 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSDC2-202ENST00000460790 DCAF4Q8WV16 495 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 SLC26A6Q9BXS9 759 aa12.66□□□□□ -0.38
CSDC2-202ENST00000460790 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
CSDC2-202ENST00000460790 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
CSDC2-202ENST00000460790 STX6O43752 255 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 PTPRAP18433 802 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
CSDC2-202ENST00000460790 PKP1Q13835 747 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 GPATCH4Q5T3I0 446 aaKnown RBP12.65□□□□□ -0.38
CSDC2-202ENST00000460790 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
CSDC2-202ENST00000460790 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 SH2D4AQ9H788 454 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 ZDHHC9Q9Y397 364 aa12.65□□□□□ -0.38
CSDC2-202ENST00000460790 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
CSDC2-202ENST00000460790 CNTNAP5Q8WYK1 1306 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 TCHHQ07283 1943 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 OTOFQ9HC10 1997 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 CYTH3O43739 400 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 DEXIO95424 95 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 BRD1O95696 1058 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms