RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 DIS3L2Q8IYB7 885 aaKnown RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 MYL10Q9BUA6 226 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 MCOLN1Q9GZU1 580 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-205ENST00000460485 PSME4Q14997 1843 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
ERCC3-205ENST00000460485 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-205ENST00000460485 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 GRIPAP1Q4V328 841 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 MFSD14BQ5SR56 506 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
ERCC3-205ENST00000460485 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 BPIFA3Q9BQP9 254 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 INCENPQ9NQS7 918 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 CLIC4Q9Y696 253 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 TLL2Q9Y6L7 1015 aa16.22■□□□□ 0.19
ERCC3-205ENST00000460485 PTMAP06454 111 aaKnown RBP16.21■□□□□ 0.19
ERCC3-205ENST00000460485 CALML3P27482 149 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 KRT2P35908 639 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 BTDP43251 543 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 FUT2Q10981 343 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 DHX8Q14562 1220 aaKnown RBP16.21■□□□□ 0.19
ERCC3-205ENST00000460485 PTPAQ15257 358 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 CAMK4Q16566 473 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 AXDND1Q5T1B0 1012 aaPredicted RBP16.21■□□□□ 0.19
ERCC3-205ENST00000460485 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 GALNT17Q6IS24 598 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 MPNDQ8N594 471 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.19
ERCC3-205ENST00000460485 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 ZKSCAN5Q9Y2L8 839 aa16.21■□□□□ 0.19
ERCC3-205ENST00000460485 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 C6orf229H3BNL8 230 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF165P49910 485 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 CST9Q5W186 159 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 RESP18Q5W5W9 173 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 CC2D2BQ6DHV5 1058 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 C16orf86Q6ZW13 317 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 SH3RF3Q8TEJ3 882 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 HHIPL1Q96JK4 782 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 SDF4Q9BRK5 362 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
ERCC3-205ENST00000460485 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
ERCC3-205ENST00000460485 CYP2D7A0A087X1C5 515 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 MYO1BO43795 1136 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 ADCY5O95622 1261 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 TSPY3P0CV98 308 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 TSPY8P0CW00 308 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 CDC25BP30305 580 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 KANK3Q6NY19 840 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 SARM1Q6SZW1 724 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-205ENST00000460485 CKAP2LQ8IYA6 745 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 CCDC148Q8NFR7 591 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 MRIQ9BWK5 157 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
ERCC3-205ENST00000460485 GREB1LQ9C091 1923 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-205ENST00000460485 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-205ENST00000460485 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-205ENST00000460485 TPM4P67936 248 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 GRM4Q14833 912 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-205ENST00000460485 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-205ENST00000460485 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
ERCC3-205ENST00000460485 PSMD1Q99460 953 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 CBX8Q9HC52 389 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 KIAA1468Q9P260 1216 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 FLT1P17948 1338 aa16.18■□□□□ 0.18
ERCC3-205ENST00000460485 PRDM1O75626 825 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 ZNF202O95125 648 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 USP17L8P0C7I0 530 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 SCG2P13521 617 aa16.17■□□□□ 0.18
ERCC3-205ENST00000460485 PFKFB1P16118 471 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms