RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 BRMS1Q9HCU9 246 aa6.3□□□□□ -1.4
TTC3-211ENST00000460328 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
TTC3-211ENST00000460328 LTKP29376 864 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 ASPNQ9BXN1 380 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 GGT7Q9UJ14 662 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 PCDHB14Q9Y5E9 798 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 PCDHA11Q9Y5I1 949 aa6.29□□□□□ -1.4
TTC3-211ENST00000460328 SHISA3A0PJX4 238 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 GREM1O60565 184 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 HPXP02790 462 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 GBP1P32455 592 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 CRKP46108 304 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 CHMP4BP1P59074 171 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 MLECQ14165 292 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 HS2ST1Q7LGA3 356 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 ROBO2Q9HCK4 1378 aa6.28□□□□□ -1.4
TTC3-211ENST00000460328 SLC22A31A6NKX4 558 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 RGS13O14921 159 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 RAG1P15918 1043 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
TTC3-211ENST00000460328 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 DIRC2Q96SL1 478 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
TTC3-211ENST00000460328 ADAMTS1Q9UHI8 967 aa6.27□□□□□ -1.41
TTC3-211ENST00000460328 UBOX5O94941 541 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 ZGLP1P0C6A0 271 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
TTC3-211ENST00000460328 CLEC16AQ2KHT3 1053 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 SYDE1Q6ZW31 735 aaPredicted RBP6.26□□□□□ -1.41
TTC3-211ENST00000460328 VWCEQ96DN2 955 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 BCL11AQ9H165 835 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 UBP1Q9NZI7 540 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 GMIPQ9P107 970 aa6.26□□□□□ -1.41
TTC3-211ENST00000460328 RBM47A0AV96 593 aaKnown RBP6.25□□□□□ -1.41
TTC3-211ENST00000460328 ATE1O95260 518 aa6.25□□□□□ -1.41
TTC3-211ENST00000460328 POLR2BP30876 1174 aaKnown RBP6.25□□□□□ -1.41
TTC3-211ENST00000460328 SEZ6Q53EL9 994 aa6.25□□□□□ -1.41
TTC3-211ENST00000460328 PDZD8Q8NEN9 1154 aa6.25□□□□□ -1.41
TTC3-211ENST00000460328 BHLHE22Q8NFJ8 381 aaPredicted RBP6.25□□□□□ -1.41
TTC3-211ENST00000460328 APOBRQ0VD83 1088 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 SPOCD1Q6ZMY3 1216 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 GK5Q6ZS86 529 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 TMEM87AQ8NBN3 555 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 FBXO15Q8NCQ5 510 aaPredicted RBP6.24□□□□□ -1.41
TTC3-211ENST00000460328 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
TTC3-211ENST00000460328 PPP1R16BQ96T49 567 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 KCNK12Q9HB15 430 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 SP110Q9HB58 689 aa6.24□□□□□ -1.41
TTC3-211ENST00000460328 TSPAN15O95858 294 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 ZNF16P17020 682 aaPredicted RBP6.23□□□□□ -1.41
TTC3-211ENST00000460328 MCM4P33991 863 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 RAP1GAPP47736 663 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 RNF4P78317 190 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 TEKQ02763 1124 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 CLCQ05315 142 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 NMIQ13287 307 aaPredicted RBP6.23□□□□□ -1.41
TTC3-211ENST00000460328 TIGD5Q53EQ6 642 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 TMCO4Q5TGY1 634 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 OXR1Q8N573 874 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
TTC3-211ENST00000460328 ASCC2Q9H1I8 757 aaPredicted RBP6.23□□□□□ -1.41
TTC3-211ENST00000460328 EPB41L4BQ9H329 900 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
TTC3-211ENST00000460328 DCP1AQ9NPI6 582 aaPredicted RBP6.23□□□□□ -1.41
TTC3-211ENST00000460328 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
TTC3-211ENST00000460328 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 CDCP2Q5VXM1 449 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 LILRA2Q8N149 483 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 NKD1Q969G9 470 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 ATG4CQ96DT6 458 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 ZNF512BQ96KM6 892 aaPredicted RBP6.22□□□□□ -1.41
TTC3-211ENST00000460328 HDAC8Q9BY41 377 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.22□□□□□ -1.41
TTC3-211ENST00000460328 CNNM2Q9H8M5 875 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 EBF1Q9UH73 591 aa6.22□□□□□ -1.41
TTC3-211ENST00000460328 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 ZNF165P49910 485 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
TTC3-211ENST00000460328 NLRC3Q7RTR2 1065 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 TMC3Q7Z5M5 1100 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 REXO1Q8N1G1 1221 aaKnown RBP6.21□□□□□ -1.42
TTC3-211ENST00000460328 EAF1Q96JC9 268 aaPredicted RBP6.21□□□□□ -1.42
TTC3-211ENST00000460328 ANTXR1Q9H6X2 564 aa6.21□□□□□ -1.42
TTC3-211ENST00000460328 NFIBO00712 420 aa6.2□□□□□ -1.42
TTC3-211ENST00000460328 CLEC3AO75596 197 aa6.2□□□□□ -1.42
TTC3-211ENST00000460328 KRT1P04264 644 aa6.2□□□□□ -1.42
TTC3-211ENST00000460328 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
TTC3-211ENST00000460328 DUSP4Q13115 394 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms