RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 BIN2Q9UBW5 565 aaPredicted RBP16.46■□□□□ 0.23
PTPRU-205ENST00000460170 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
PTPRU-205ENST00000460170 IQCDQ96DY2 449 aa16.46■□□□□ 0.22
PTPRU-205ENST00000460170 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.22
PTPRU-205ENST00000460170 ERCC3P19447 782 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 ERCC6LQ2NKX8 1250 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 KIAA1524Q8TCG1 905 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 IKBKBO14920 756 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 RBM26Q5T8P6 1007 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 SYMPKQ92797 1274 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 IKBKGQ9Y6K9 419 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 H7C1D1 291 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 CCDC26Q8TAB7 109 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 MTRF1LQ9UGC7 380 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 CYP27B1O15528 508 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 ATP2C2O75185 946 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 CACTINQ8WUQ7 758 aaKnown RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 KIF2CQ99661 725 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
PTPRU-205ENST00000460170 TBC1D7Q9P0N9 293 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 ATP6V0A2Q9Y487 856 aa16.45■□□□□ 0.22
PTPRU-205ENST00000460170 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-205ENST00000460170 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 NELFCDQ8IXH7 590 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 IFNAR1P17181 557 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 GJC1P36383 396 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 DNM2P50570 870 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPRU-205ENST00000460170 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
PTPRU-205ENST00000460170 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 TLDC2A0PJX2 215 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 GTF2IP78347 998 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
PTPRU-205ENST00000460170 GSDMAQ96QA5 445 aa16.44■□□□□ 0.22
PTPRU-205ENST00000460170 STX10O60499 249 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 RAD51AP2Q09MP3 1159 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 TTC14Q96N46 770 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 A0A087WWV3 80 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 SEMA3EO15041 775 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 OR52Z1P0C646 297 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 NUCKS1Q9H1E3 243 aaKnown RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 ERCC5P28715 1186 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 KLHL30Q0D2K2 578 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 NAP1L3Q99457 506 aaPredicted RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 IFIH1Q9BYX4 1025 aaKnown RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 BACH1O14867 736 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 KIF4AO95239 1232 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 TECP42680 631 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 TCP10Q12799 353 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 NEK8Q86SG6 692 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 RNASE9P60153 205 aaKnown RBP16.43■□□□□ 0.22
PTPRU-205ENST00000460170 GSTA5Q7RTV2 222 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 CCDC50Q8IVM0 306 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
PTPRU-205ENST00000460170 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
PTPRU-205ENST00000460170 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 ZSWIM5Q9P217 1185 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 ATP2A1O14983 1001 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 PRKAB2O43741 272 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 LIFRP42702 1097 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 MNAT1P51948 309 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 CALCOCO2Q13137 446 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 AXIN2Q9Y2T1 843 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 PLCB3Q01970 1234 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 GPIHBP1Q8IV16 184 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 ZDHHC9Q9Y397 364 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 SP4Q02446 784 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 IFT20Q8IY31 132 aa16.42■□□□□ 0.22
PTPRU-205ENST00000460170 NLRC4Q9NPP4 1024 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms