RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CASC1Q6TDU7 716 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 STK11IPQ8N1F8 1099 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 APPBP2Q92624 585 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 SEC62Q99442 399 aaKnown RBP18.59■□□□□ 0.57
SDF4-204ENST00000459994 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
SDF4-204ENST00000459994 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 GSG1L2A8MUP6 293 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L15C9J2P7 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L13C9JLJ4 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L11C9JVI0 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L18D6R9N7 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L22D6RA61 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L17D6RBQ6 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L19D6RCP7 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L20D6RJB6 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 USP17L24Q0WX57 530 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 NMIQ13287 307 aaPredicted RBP18.58■□□□□ 0.56
SDF4-204ENST00000459994 C16orf86Q6ZW13 317 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 UBE2Q1Q7Z7E8 422 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 GPRC5AQ8NFJ5 357 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 RUFY2Q8WXA3 655 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 TRIB2Q92519 343 aa18.58■□□□□ 0.56
SDF4-204ENST00000459994 EPB41L4AQ9HCS5 686 aaPredicted RBP18.58■□□□□ 0.56
SDF4-204ENST00000459994 SPDYE16A6NNV3 312 aaPredicted RBP18.57■□□□□ 0.56
SDF4-204ENST00000459994 CYP2B6P20813 491 aa18.57■□□□□ 0.56
SDF4-204ENST00000459994 USP14P54578 494 aa18.57■□□□□ 0.56
SDF4-204ENST00000459994 U2AF1L4Q8WU68 220 aaKnown RBP18.57■□□□□ 0.56
SDF4-204ENST00000459994 SWAP70Q9UH65 585 aa18.57■□□□□ 0.56
SDF4-204ENST00000459994 RAD50Q92878 1312 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 CCL14Q16627 93 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
SDF4-204ENST00000459994 TMEM179Q6ZVK1 233 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 GPR142Q7Z601 462 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 USP6NLQ92738 828 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
SDF4-204ENST00000459994 PAK6Q9NQU5 681 aaPredicted RBP18.56■□□□□ 0.56
SDF4-204ENST00000459994 A0A0D9SFI3 127 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 GPAA1O43292 621 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 SGPL1O95470 568 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 C8orf34Q49A92 452 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 SPICE1Q8N0Z3 855 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
SDF4-204ENST00000459994 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDF4-204ENST00000459994 PLXNA1Q9UIW2 1896 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 ZNF236Q9UL36 1845 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 SGSM2O43147 1006 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 EIF5BO60841 1220 aaKnown RBP18.54■□□□□ 0.56
SDF4-204ENST00000459994 ICA1Q05084 483 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 MORN1Q5T089 497 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDF4-204ENST00000459994 RABGAP1Q9Y3P9 1069 aa18.54■□□□□ 0.56
SDF4-204ENST00000459994 HMGCRP04035 888 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 EEF2P13639 858 aaKnown RBP18.53■□□□□ 0.56
SDF4-204ENST00000459994 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
SDF4-204ENST00000459994 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 LBX2Q6XYB7 198 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 NUDT12Q9BQG2 462 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 ARPP21Q9UBL0 812 aaPredicted RBP18.53■□□□□ 0.56
SDF4-204ENST00000459994 TMX2Q9Y320 296 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 ROBO3Q96MS0 1386 aa18.53■□□□□ 0.56
SDF4-204ENST00000459994 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 RASA1P20936 1047 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 MAPK4P31152 587 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 CCDC129Q6ZRS4 1044 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 PLEKHH3Q7Z736 793 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 DIS3LQ8TF46 1054 aaKnown RBP18.52■□□□□ 0.56
SDF4-204ENST00000459994 GTF3C2Q8WUA4 911 aaPredicted RBP18.52■□□□□ 0.56
SDF4-204ENST00000459994 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 CRISPLD2Q9H0B8 497 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 FLRT1Q9NZU1 646 aa18.52■□□□□ 0.56
SDF4-204ENST00000459994 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 FOXP2O15409 715 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
SDF4-204ENST00000459994 SLC34A2O95436 690 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 CCDC17Q96LX7 622 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 IL25Q9H293 177 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 VCPKMTQ9H867 229 aa18.51■□□□□ 0.55
SDF4-204ENST00000459994 TFRCP02786 760 aaKnown RBP18.5■□□□□ 0.55
SDF4-204ENST00000459994 MNX1P50219 401 aaPredicted RBP18.5■□□□□ 0.55
SDF4-204ENST00000459994 ATP2B2Q01814 1243 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 WDR78Q5VTH9 848 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
SDF4-204ENST00000459994 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
SDF4-204ENST00000459994 AMOTL1Q8IY63 956 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 SOCS4Q8WXH5 440 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 ATG4CQ96DT6 458 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 ARHGEF10LQ9HCE6 1279 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 FBXO28Q9NVF7 368 aa18.5■□□□□ 0.55
SDF4-204ENST00000459994 RPTORQ8N122 1335 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 H0YGN5 161 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 PRDM1O75626 825 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
SDF4-204ENST00000459994 GNAT2P19087 354 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms