RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 ARMT1Q9H993 441 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 MCM9Q9NXL9 1143 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 CDH23Q9H251 3354 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 POLR3DP05423 398 aaPredicted RBP11.89□□□□□ -0.51
SYN3-205ENST00000459990 HOXC6P09630 235 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 AKR1B1P15121 316 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 CYP2C19P33261 490 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 ADD2P35612 726 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
SYN3-205ENST00000459990 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 TRMT44Q8IYL2 757 aaKnown RBP11.89□□□□□ -0.51
SYN3-205ENST00000459990 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
SYN3-205ENST00000459990 CRNKL1Q9BZJ0 848 aaKnown RBP11.89□□□□□ -0.51
SYN3-205ENST00000459990 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
SYN3-205ENST00000459990 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
SYN3-205ENST00000459990 MBD4O95243 580 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 CYBAP13498 195 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 C20orf194Q5TEA3 1177 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
SYN3-205ENST00000459990 Q7L0L9 218 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 CCAR1Q8IX12 1150 aaKnown RBP11.88□□□□□ -0.51
SYN3-205ENST00000459990 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
SYN3-205ENST00000459990 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 CABP5Q9NP86 173 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
SYN3-205ENST00000459990 SMCHD1A6NHR9 2005 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 COBLO75128 1261 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
SYN3-205ENST00000459990 ADORA2AP29274 412 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 CCNA1P78396 465 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 RPAP2Q8IXW5 612 aaPredicted RBP11.87□□□□□ -0.51
SYN3-205ENST00000459990 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
SYN3-205ENST00000459990 DDX20Q9UHI6 824 aaKnown RBP11.87□□□□□ -0.51
SYN3-205ENST00000459990 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
SYN3-205ENST00000459990 ATP5JP18859 108 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 ERCC3P19447 782 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 TMEM179Q6ZVK1 233 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 HAUS7Q99871 368 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
SYN3-205ENST00000459990 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 MCM3APO60318 1980 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
SYN3-205ENST00000459990 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
SYN3-205ENST00000459990 ICA1Q05084 483 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 COG2Q14746 738 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 C12orf60Q5U649 245 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 MFSD14CQ5VZR4 134 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
SYN3-205ENST00000459990 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
SYN3-205ENST00000459990 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 FBXO28Q9NVF7 368 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 IVNS1ABPQ9Y6Y0 642 aa11.85□□□□□ -0.51
SYN3-205ENST00000459990 USP17L12C9JPN9 530 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 USP17L21D6R901 530 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 HMMRO75330 724 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
SYN3-205ENST00000459990 CNGA1P29973 690 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 DSG3P32926 999 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 CDK8P49336 464 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
SYN3-205ENST00000459990 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 TMEM132BQ14DG7 1078 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 OLFML2BQ68BL8 750 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 C16orf86Q6ZW13 317 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 LPAR1Q92633 364 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
SYN3-205ENST00000459990 SENP6Q9GZR1 1112 aaPredicted RBP11.84□□□□□ -0.51
SYN3-205ENST00000459990 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
SYN3-205ENST00000459990 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 DNM1LO00429 736 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 WDR46O15213 610 aaKnown RBP11.83□□□□□ -0.52
SYN3-205ENST00000459990 FLOT1O75955 427 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
SYN3-205ENST00000459990 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 GJC2Q5T442 439 aaPredicted RBP11.83□□□□□ -0.52
SYN3-205ENST00000459990 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 DEFB123Q8N688 67 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 REPS2Q8NFH8 660 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 LCTP09848 1927 aa11.83□□□□□ -0.52
SYN3-205ENST00000459990 PRUNE2Q8WUY3 3088 aa11.82□□□□□ -0.52
SYN3-205ENST00000459990 MSCO60682 206 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms