RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 VCAM1P19320 739 aa30.48■■■□□ 2.47
SEMA3C-205ENST00000458729 B4E1Z4 1266 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L15C9J2P7 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L13C9JLJ4 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L11C9JVI0 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L18D6R9N7 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L22D6RA61 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L17D6RBQ6 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L19D6RCP7 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L20D6RJB6 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 KDM4AO75164 1064 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 CYP2C8P10632 490 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 IRX3P78415 501 aaPredicted RBP30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 USP17L24Q0WX57 530 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 CCDC178Q5BJE1 867 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 RNF20Q5VTR2 975 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 ASCC2Q9H1I8 757 aaPredicted RBP30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 PRDM10Q9NQV6 1147 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 STX8Q9UNK0 236 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 E7EWF7 191 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 NMT2O60551 498 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 NOVP48745 357 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 CREB3L3Q68CJ9 461 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 IQCA1Q86XH1 822 aa30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 SMCR8Q8TEV9 937 aaPredicted RBP30.47■■■□□ 2.47
SEMA3C-205ENST00000458729 SLC27A2O14975 620 aa30.46■■■□□ 2.47
SEMA3C-205ENST00000458729 CATSPERGQ6ZRH7 1159 aa30.46■■■□□ 2.47
SEMA3C-205ENST00000458729 TTC14Q96N46 770 aa30.46■■■□□ 2.47
SEMA3C-205ENST00000458729 RPAP3Q9H6T3 665 aaPredicted RBP30.46■■■□□ 2.47
SEMA3C-205ENST00000458729 WDR46O15213 610 aaKnown RBP30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 EPB41L2O43491 1005 aaKnown RBP30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 KIAA1755Q5JYT7 1200 aa30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 RALYLQ86SE5 291 aaKnown RBP30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 NCOA7Q8NI08 942 aa30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 ZSWIM5Q9P217 1185 aa30.45■■■□□ 2.46
SEMA3C-205ENST00000458729 F5H6K3 240 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 FKTNO75072 461 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 KLRC3Q07444 240 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 C17orf99Q6UX52 265 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 SPICE1Q8N0Z3 855 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 GMCL1P1Q8NEA9 526 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 ADGRA2Q96PE1 1338 aa30.44■■■□□ 2.46
SEMA3C-205ENST00000458729 RAD21O60216 631 aa30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 GCLCP48506 637 aaPredicted RBP30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 LRRC47Q8N1G4 583 aaKnown RBP30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 NKX2-3Q8TAU0 364 aa30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 GTF3C2Q8WUA4 911 aaPredicted RBP30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 ZNF296Q8WUU4 475 aaPredicted RBP30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 P2RX7Q99572 595 aaKnown RBP30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 TAF6LQ9Y6J9 622 aa30.43■■■□□ 2.46
SEMA3C-205ENST00000458729 MYH4Q9Y623 1939 aa30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 EIF5BO60841 1220 aaKnown RBP30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 SP3Q02447 781 aa30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 DGKHQ86XP1 1220 aa30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 TANGO6Q9C0B7 1094 aa30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 CPA4Q9UI42 421 aa30.42■■■□□ 2.46
SEMA3C-205ENST00000458729 NDUFB10O96000 172 aa30.41■■■□□ 2.46
SEMA3C-205ENST00000458729 TOP1P11387 765 aaKnown RBP30.41■■■□□ 2.46
SEMA3C-205ENST00000458729 STOX1Q6ZVD7 989 aa30.41■■■□□ 2.46
SEMA3C-205ENST00000458729 ZSCAN10Q96SZ4 725 aaPredicted RBP30.41■■■□□ 2.46
SEMA3C-205ENST00000458729 UBAC1Q9BSL1 405 aa30.41■■■□□ 2.46
SEMA3C-205ENST00000458729 ZKSCAN1P17029 563 aaPredicted RBP30.4■■■□□ 2.46
SEMA3C-205ENST00000458729 HERVK_113P62684 666 aa30.4■■■□□ 2.46
SEMA3C-205ENST00000458729 COG2Q14746 738 aa30.4■■■□□ 2.46
SEMA3C-205ENST00000458729 ZKSCAN3Q9BRR0 538 aa30.4■■■□□ 2.46
SEMA3C-205ENST00000458729 HOXC10Q9NYD6 342 aa30.4■■■□□ 2.46
SEMA3C-205ENST00000458729 BCRP11274 1271 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 TSGA10IPQ3SY00 556 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 SLFN13Q68D06 897 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 RCSD1Q6JBY9 416 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 ANKS1AQ92625 1134 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 TMEM47Q9BQJ4 181 aa30.39■■■□□ 2.46
SEMA3C-205ENST00000458729 ERO1AQ96HE7 468 aa30.38■■■□□ 2.45
SEMA3C-205ENST00000458729 HSPA4P34932 840 aa30.37■■■□□ 2.45
SEMA3C-205ENST00000458729 FAM83BQ5T0W9 1011 aa30.37■■■□□ 2.45
SEMA3C-205ENST00000458729 CYB5R4Q7L1T6 521 aa30.37■■■□□ 2.45
SEMA3C-205ENST00000458729 GMCL1Q96IK5 515 aa30.37■■■□□ 2.45
SEMA3C-205ENST00000458729 TNKSO95271 1327 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 MYPNQ86TC9 1320 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 FLOT1O75955 427 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 KRT32Q14532 448 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 FAM110CQ1W6H9 321 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 LBX2Q6XYB7 198 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 MB21D2Q8IYB1 491 aaPredicted RBP30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 ANKRD13CQ8N6S4 541 aa30.36■■■□□ 2.45
SEMA3C-205ENST00000458729 KIF22Q14807 665 aa30.35■■■□□ 2.45
SEMA3C-205ENST00000458729 SART3Q15020 963 aaKnown RBP30.35■■■□□ 2.45
SEMA3C-205ENST00000458729 ENAHQ8N8S7 591 aaPredicted RBP30.35■■■□□ 2.45
SEMA3C-205ENST00000458729 KCNB2Q92953 911 aa30.35■■■□□ 2.45
SEMA3C-205ENST00000458729 CASP8AP2Q9UKL3 1982 aa30.35■■■□□ 2.45
SEMA3C-205ENST00000458729 ERICH2A1L162 156 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 SPDYE16A6NNV3 312 aaPredicted RBP30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 BMP3P12645 472 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 DSG3P32926 999 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 SLC1A4P43007 532 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 ARHGEF6Q15052 776 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 NUP88Q99567 741 aaPredicted RBP30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 MTA3Q9BTC8 594 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 USP26Q9BXU7 913 aa30.34■■■□□ 2.45
SEMA3C-205ENST00000458729 MORF4L1Q9UBU8 362 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms