RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 UBE2Q2LH0YL09 131 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 H3BQF6 201 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 PDE6AP16499 860 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 RCAN1P53805 252 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 CUL4BQ13620 913 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 CTR9Q6PD62 1173 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 SH3RF1Q7Z6J0 888 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 IFNLR1Q8IU57 520 aaPredicted RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 ZBTB38Q8NAP3 1195 aaPredicted RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 CCDC51Q96ER9 411 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 CTAGE1Q96RT6 745 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 STRBPQ96SI9 672 aaKnown RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 PSMD1Q99460 953 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 IRX2Q9BZI1 471 aaPredicted RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 CNNM2Q9H8M5 875 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 PIH1D3Q9NQM4 214 aaKnown RBP9.65□□□□□ -0.86
VPS50-208ENST00000458707 CEP131Q9UPN4 1083 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
VPS50-208ENST00000458707 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 TEX33O43247 280 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 KIF5CO60282 957 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 MFAP3LO75121 409 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 TUBBP07437 444 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 RBL2Q08999 1139 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 ZNF827Q17R98 1081 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 HDXQ7Z353 690 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 IGSF22Q8N9C0 903 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 SEC31BQ9NQW1 1179 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 STRN4Q9NRL3 753 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 AATFQ9NY61 560 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS50-208ENST00000458707 CWC15Q9P013 229 aaKnown RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 CEP83Q9Y592 693 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 PCDHB6Q9Y5E3 794 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 A0A1B0GUL6 1792 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 SYNRGQ9UMZ2 1314 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 RREB1Q92766 1687 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 IFIT3O14879 490 aaKnown RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 ERLIN1O75477 346 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 RPS6KA5O75582 802 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 DEXIO95424 95 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 ACTN2P35609 894 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 METTL24Q5JXM2 366 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 TRIM22Q8IYM9 498 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 GRAMD1CQ8IYS0 662 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 KRT23Q9C075 422 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 MYO1AQ9UBC5 1043 aa9.64□□□□□ -0.87
VPS50-208ENST00000458707 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
VPS50-208ENST00000458707 DCCP43146 1447 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 ABCA3Q99758 1704 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 AKNAD1Q5T1N1 836 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 IFNL3Q8IZI9 196 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
VPS50-208ENST00000458707 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 GSDMAQ96QA5 445 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 PNKPQ96T60 521 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 NCAPGQ9BPX3 1015 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 CSRNP2Q9H175 543 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 LZTFL1Q9NQ48 299 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 WWC3Q9ULE0 1092 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 KCNJ14Q9UNX9 436 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 TACC3Q9Y6A5 838 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 LAMB2P55268 1798 aa9.63□□□□□ -0.87
VPS50-208ENST00000458707 LAMB1P07942 1786 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 CASZ1Q86V15 1759 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 CCDC196A0A1B0GTZ2 297 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 CTAGE9A4FU28 777 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 LRRC10BA6NIK2 292 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 EIF3JO75822 258 aaKnown RBP9.62□□□□□ -0.87
VPS50-208ENST00000458707 IDH1O75874 414 aaKnown RBP9.62□□□□□ -0.87
VPS50-208ENST00000458707 PDE8BO95263 885 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 GYPCP04921 128 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 DPYDQ12882 1025 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 RTN1Q16799 776 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 WHAMMP3Q1A5X7 153 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 NBPF9Q3BBW0 867 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 USP49Q70CQ1 688 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 TMTC1Q8IUR5 882 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 STAG1Q8WVM7 1258 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 GBP3Q9H0R5 595 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 A0A0U1RQJ8 604 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 ITGA6P23229 1130 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms