RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 ERVK-24P63145 666 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 USP17L24Q0WX57 530 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 SEPT2Q15019 361 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 WDR78Q5VTH9 848 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 LHX8Q68G74 356 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 ZSCAN25Q6NSZ9 544 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 GPR142Q7Z601 462 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 ACER1Q8TDN7 264 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 C12orf42Q96LP6 360 aa18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 SENP6Q9GZR1 1112 aaPredicted RBP18.97■□□□□ 0.63
CHCHD3-204ENST00000457942 PRKAB2O43741 272 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 RGS2P41220 211 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 EVX2Q03828 476 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 GABPAQ06546 454 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 Q3C1V9 767 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 APBA2Q99767 749 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 LBHD1Q9BQE6 289 aaPredicted RBP18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 KIAA1683Q9H0B3 1180 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 RBPJLQ9UBG7 517 aa18.96■□□□□ 0.63
CHCHD3-204ENST00000457942 ZNF697Q5TEC3 545 aa18.95■□□□□ 0.62
CHCHD3-204ENST00000457942 DYNLL2Q96FJ2 89 aa18.95■□□□□ 0.62
CHCHD3-204ENST00000457942 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
CHCHD3-204ENST00000457942 ECHDC1Q9NTX5 307 aa18.95■□□□□ 0.62
CHCHD3-204ENST00000457942 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
CHCHD3-204ENST00000457942 PRUNE2Q8WUY3 3088 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 CHGBP05060 677 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 XRCC5P13010 732 aaKnown RBP18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 CNGA1P29973 690 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 CCNA1P78396 465 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 UBE3CQ15386 1083 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 PLEKHH3Q7Z736 793 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 RPAP3Q9H6T3 665 aaPredicted RBP18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 SLC4A4Q9Y6R1 1079 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 LTBP2Q14767 1821 aa18.94■□□□□ 0.62
CHCHD3-204ENST00000457942 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 MORN1Q5T089 497 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 CATSPERGQ6ZRH7 1159 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 TMEM179Q6ZVK1 233 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 USP6NLQ92738 828 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 TANGO6Q9C0B7 1094 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 FLRT1Q9NZU1 646 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 RABGAP1Q9Y3P9 1069 aa18.93■□□□□ 0.62
CHCHD3-204ENST00000457942 CYP2D7A0A087X1C5 515 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 GLRX3O76003 335 aaKnown RBP18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 TSHZ3Q63HK5 1081 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 DCTPP1Q9H773 170 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 ARHGEF10LQ9HCE6 1279 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 PRDM5Q9NQX1 630 aaPredicted RBP18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 ATP11BQ9Y2G3 1177 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
CHCHD3-204ENST00000457942 USP17L12C9JPN9 530 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 USP17L21D6R901 530 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 ICA1Q05084 483 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 PUS7LQ9H0K6 701 aaKnown RBP18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 SH2D4AQ9H788 454 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 PRKAG2Q9UGJ0 569 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 IVNS1ABPQ9Y6Y0 642 aa18.91■□□□□ 0.62
CHCHD3-204ENST00000457942 SPDYE16A6NNV3 312 aaPredicted RBP18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 AKR1B1P15121 316 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 RTP1P59025 263 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 ATP2B2Q01814 1243 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 MAP2K5Q13163 448 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 MFSD14CQ5VZR4 134 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 ANO1Q5XXA6 986 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 MAFAQ8NHW3 353 aaPredicted RBP18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 CDX2Q99626 313 aaPredicted RBP18.9■□□□□ 0.62
CHCHD3-204ENST00000457942 A0A1W2PRG0 241 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 CNMDO75829 334 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 CYP2C19P33261 490 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 CDK8P49336 464 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 C9orf50Q5SZB4 431 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 C12orf60Q5U649 245 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 FAM109BQ6ICB4 259 aaPredicted RBP18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 KBTBD3Q8NAB2 608 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 MYLIPQ8WY64 445 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 CCDC17Q96LX7 622 aa18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 ARPP21Q9UBL0 812 aaPredicted RBP18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 DDX20Q9UHI6 824 aaKnown RBP18.89■□□□□ 0.61
CHCHD3-204ENST00000457942 RAD21O60216 631 aa18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 SHHQ15465 462 aa18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 GJC2Q5T442 439 aaPredicted RBP18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 C16orf86Q6ZW13 317 aa18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 SPICE1Q8N0Z3 855 aa18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 BTBD7Q9P203 1132 aa18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
CHCHD3-204ENST00000457942 SMIM22K7EJ46 135 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 RRP1P56182 461 aaKnown RBP18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 COG2Q14746 738 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 LBX2Q6XYB7 198 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
CHCHD3-204ENST00000457942 TRPV1Q8NER1 839 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms