RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 SENP6Q9GZR1 1112 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 SLC15A5A6NIM6 579 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 MSCO60682 206 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 USP5P45974 858 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 RAB3GAP1Q15042 981 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 TATDN1Q6P1N9 297 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 CATSPERGQ6ZRH7 1159 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 IVNS1ABPQ9Y6Y0 642 aa17.51■□□□□ 0.39
UPF3AP2-201ENST00000457924 CNMDO75829 334 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 PTPREP23469 700 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 CNGA1P29973 690 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 DDX20Q9UHI6 824 aaKnown RBP17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 SERPINB13Q9UIV8 391 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
UPF3AP2-201ENST00000457924 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 VCAM1P19320 739 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 ABCB5Q2M3G0 1257 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 CERKLQ49MI3 558 aaPredicted RBP17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 LPAR1Q92633 364 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 KIAA1683Q9H0B3 1180 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 EHD4Q9H223 541 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
UPF3AP2-201ENST00000457924 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 BCAR3O75815 825 aa17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 LBX2Q6XYB7 198 aa17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
UPF3AP2-201ENST00000457924 DNM1LO00429 736 aa17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 HOXC6P09630 235 aa17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 GRB14Q14449 540 aa17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 MAGEB6Q8N7X4 407 aa17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 BTBD7Q9P203 1132 aa17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 DBNLQ9UJU6 430 aaKnown RBP17.47■□□□□ 0.39
UPF3AP2-201ENST00000457924 SPDYE16A6NNV3 312 aaPredicted RBP17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 CYP2C19P33261 490 aa17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 NPLOC4Q8TAT6 608 aa17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 ACER1Q8TDN7 264 aa17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 RPAP3Q9H6T3 665 aaPredicted RBP17.46■□□□□ 0.39
UPF3AP2-201ENST00000457924 A0A0C4DFX4 3053 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 RTP1P59025 263 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 TMED8Q6PL24 325 aaPredicted RBP17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 DPP9Q86TI2 863 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 ARRDC4Q8NCT1 418 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 GUCD1Q96NT3 240 aa17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
UPF3AP2-201ENST00000457924 TRPV1Q8NER1 839 aa17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 COL25A1Q9BXS0 654 aaPredicted RBP17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 LTBP2Q14767 1821 aa17.44■□□□□ 0.38
UPF3AP2-201ENST00000457924 RLFQ13129 1914 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 KBTBD13C9JR72 458 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 STRNO43815 780 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 CYBAP13498 195 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 SHMT1P34896 483 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 PLCD1P51178 756 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 COG2Q14746 738 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 GJC2Q5T442 439 aaPredicted RBP17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 OLFML2BQ68BL8 750 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 EAF2Q96CJ1 260 aaPredicted RBP17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
UPF3AP2-201ENST00000457924 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 ADORA2AP29274 412 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 GUCY1A2P33402 732 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 SEPT2Q15019 361 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 MOV10L1Q9BXT6 1211 aaKnown RBP17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
UPF3AP2-201ENST00000457924 NAV1Q8NEY1 1877 aa17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 MAGEB6P1A0A0J9YX57 407 aa17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 IGHA2P01877 340 aa17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 SLC39A5Q6ZMH5 540 aa17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 SHCBP1Q8NEM2 672 aa17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 PRDM5Q9NQX1 630 aaPredicted RBP17.41■□□□□ 0.38
UPF3AP2-201ENST00000457924 SEPT4O43236 478 aa17.4■□□□□ 0.38
UPF3AP2-201ENST00000457924 ERCC3P19447 782 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms