RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 WNT7AO00755 349 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 ECE2O60344 883 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 GRIN1Q05586 938 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 AOC3Q16853 763 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 APOBEC3HQ6NTF7 200 aaKnown RBP13.12□□□□□ -0.31
TCF4-204ENST00000457482 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 ANKS1AQ92625 1134 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 CBX8Q9HC52 389 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 USP40Q9NVE5 1235 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 SUGT1Q9Y2Z0 365 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 CMA1P23946 247 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 CACNB3P54284 484 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 NFIAQ12857 509 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
TCF4-204ENST00000457482 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
TCF4-204ENST00000457482 MYH8P13535 1937 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 PPP6R2O75170 966 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 ZNF202O95125 648 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 ADCY5O95622 1261 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
TCF4-204ENST00000457482 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
TCF4-204ENST00000457482 ESPNB1AK53 854 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 CYTH3O43739 400 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 C21orf2O43822 256 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 SCG2P13521 617 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
TCF4-204ENST00000457482 GRM4Q14833 912 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 XBP1P17861 261 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 KIF5BP33176 963 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 KRT2P35908 639 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 CRKP46108 304 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
TCF4-204ENST00000457482 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
TCF4-204ENST00000457482 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
TCF4-204ENST00000457482 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
TCF4-204ENST00000457482 CTAGE5O15320 804 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 GABPAQ06546 454 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 TNFRSF25Q93038 417 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 AKR1B1P15121 316 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 ZNF165P49910 485 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 HHIPL2Q6UWX4 724 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
TCF4-204ENST00000457482 HPSEQ9Y251 543 aa13.09□□□□□ -0.31
TCF4-204ENST00000457482 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
TCF4-204ENST00000457482 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 JMYQ8N9B5 988 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
TCF4-204ENST00000457482 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 CUTAO60888 179 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 SYKP43405 635 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCF4-204ENST00000457482 NLRP5P59047 1200 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 TCP10Q12799 353 aa13.08□□□□□ -0.32
TCF4-204ENST00000457482 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.32
TCF4-204ENST00000457482 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
TCF4-204ENST00000457482 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
TCF4-204ENST00000457482 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 BIN1O00499 593 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 ZDHHC15Q96MV8 337 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 KLRF2D3W0D1 207 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 PTPREP23469 700 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 SHMT1P34896 483 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 NT5C2P49902 561 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 STX1AQ16623 288 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
TCF4-204ENST00000457482 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 C10orf71Q711Q0 1435 aa13.07□□□□□ -0.32
TCF4-204ENST00000457482 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
TCF4-204ENST00000457482 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
TCF4-204ENST00000457482 BAG6P46379 1132 aa13.06□□□□□ -0.32
TCF4-204ENST00000457482 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms