RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FAM47AQ5JRC9 791 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
ATG4A-206ENST00000457035 TBC1D10CQ8IV04 446 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 EMILIN3Q9NT22 766 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 DOCK3Q8IZD9 2030 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 CYP21A2P08686 494 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
ATG4A-206ENST00000457035 HMGCS2P54868 508 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 MTMR2Q13614 643 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 NECTIN1Q15223 517 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 IER5LQ5T953 404 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 ANKRD23Q86SG2 305 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 CLEC10AQ8IUN9 316 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
ATG4A-206ENST00000457035 MKL1Q969V6 931 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 CFHR5Q9BXR6 569 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 R3HDMLQ9H3Y0 253 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 ZCCHC17Q9NP64 241 aaKnown RBP11.91□□□□□ -0.5
ATG4A-206ENST00000457035 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
ATG4A-206ENST00000457035 RBM8AQ9Y5S9 174 aaKnown RBP11.91□□□□□ -0.5
ATG4A-206ENST00000457035 LOC285556D6RIA3 1793 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 RANBP6O60518 1105 aaKnown RBP11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TBC1D8O95759 1140 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TSPY3P0CV98 308 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TSPY8P0CW00 308 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
ATG4A-206ENST00000457035 RGS19P49795 217 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 ICA1Q05084 483 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TREML2Q5T2D2 321 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 USP17L2Q6R6M4 530 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 CEP95Q96GE4 821 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 RNF41Q9H4P4 317 aaPredicted RBP11.9□□□□□ -0.5
ATG4A-206ENST00000457035 ANO2Q9NQ90 1003 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 PLIN4Q96Q06 1357 aa11.9□□□□□ -0.5
ATG4A-206ENST00000457035 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 PDHXO00330 501 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 HOXA7P31268 230 aaPredicted RBP11.89□□□□□ -0.51
ATG4A-206ENST00000457035 NOVP48745 357 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 USP14P54578 494 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 SOX10P56693 466 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
ATG4A-206ENST00000457035 KIAA1755Q5JYT7 1200 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 ARHGEF10LQ9HCE6 1279 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 AGTPBP1Q9UPW5 1226 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 RLFQ13129 1914 aa11.89□□□□□ -0.51
ATG4A-206ENST00000457035 NEDD4P46934 1319 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 NMT2O60551 498 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 NT5C2P49902 561 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 CRHR2Q13324 411 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
ATG4A-206ENST00000457035 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
ATG4A-206ENST00000457035 STOX1Q6ZVD7 989 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 FEZ1Q99689 392 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 ZSWIM5Q9P217 1185 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
ATG4A-206ENST00000457035 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
ATG4A-206ENST00000457035 B4E1Z4 1266 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 E7EWF7 191 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 SLC27A2O14975 620 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 TLR2O60603 784 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 KDM4AO75164 1064 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 TTLL1O95922 423 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 PSEN1P49768 467 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 NOM1Q5C9Z4 860 aaKnown RBP11.87□□□□□ -0.51
ATG4A-206ENST00000457035 CREB3L3Q68CJ9 461 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 CTU1Q7Z7A3 348 aaKnown RBP11.87□□□□□ -0.51
ATG4A-206ENST00000457035 ESR2Q92731 530 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 KRT23Q9C075 422 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
ATG4A-206ENST00000457035 PARP14Q460N5 1801 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 F5H6K3 240 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 GPR25O00155 361 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 REC8O95072 547 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 CYP2C8P10632 490 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 VCAM1P19320 739 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 KLRC3Q07444 240 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
ATG4A-206ENST00000457035 TSGA10IPQ3SY00 556 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 RCSD1Q6JBY9 416 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms