RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 GRK4P32298 578 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 ERVK-9P63128 1117 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 ERVK-24P63145 666 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 PPARAQ07869 468 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 IRF5Q13568 498 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 VCPKMTQ9H867 229 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 KANSL2Q9H9L4 492 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 KIAA0100Q14667 2235 aaKnown RBP14.15□□□□□ -0.14
TMEM56-202ENST00000455656 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
TMEM56-202ENST00000455656 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 PRDM1O75626 825 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 GSPT1P15170 499 aaKnown RBP14.14□□□□□ -0.15
TMEM56-202ENST00000455656 SDSP20132 328 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 MLLT1Q03111 559 aaPredicted RBP14.14□□□□□ -0.15
TMEM56-202ENST00000455656 MTFR1Q15390 333 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 ALX1Q15699 326 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 MCMDC2Q4G0Z9 681 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 GPRC5AQ8NFJ5 357 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 RAET1EQ8TD07 263 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 GTF3C2Q8WUA4 911 aaPredicted RBP14.14□□□□□ -0.15
TMEM56-202ENST00000455656 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 NAPBQ9H115 298 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 PORCNQ9H237 461 aa14.14□□□□□ -0.15
TMEM56-202ENST00000455656 HSPD1P10809 573 aaKnown RBP14.13□□□□□ -0.15
TMEM56-202ENST00000455656 NBPF11Q86T75 865 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 SPICE1Q8N0Z3 855 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 PXYLP1Q8TE99 480 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 LPAR1Q92633 364 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 USP6NLQ92738 828 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 PAGR1Q9BTK6 254 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 NYAP2Q9P242 653 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 ANAPC4Q9UJX5 808 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 RABGAP1Q9Y3P9 1069 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
TMEM56-202ENST00000455656 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
TMEM56-202ENST00000455656 WDR46O15213 610 aaKnown RBP14.12□□□□□ -0.15
TMEM56-202ENST00000455656 ADCY3O60266 1144 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 FGRP09769 529 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 ELNP15502 786 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 EN2P19622 333 aaPredicted RBP14.12□□□□□ -0.15
TMEM56-202ENST00000455656 DSG3P32926 999 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 NEDD1Q8NHV4 660 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 COA7Q96BR5 231 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 IL25Q9H293 177 aa14.12□□□□□ -0.15
TMEM56-202ENST00000455656 MKI67P46013 3256 aaKnown RBP14.11□□□□□ -0.15
TMEM56-202ENST00000455656 FGAP02671 866 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 COG2Q14746 738 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 MORN1Q5T089 497 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 TTC22Q5TAA0 569 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 GPR142Q7Z601 462 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 MKL1Q969V6 931 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 NBPF3Q9H094 633 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 ADAMTS5Q9UNA0 930 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
TMEM56-202ENST00000455656 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
TMEM56-202ENST00000455656 MAPK4P31152 587 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 NOVP48745 357 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 PDE4BQ07343 736 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 FAM47AQ5JRC9 791 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
TMEM56-202ENST00000455656 ATG4CQ96DT6 458 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 TANGO6Q9C0B7 1094 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
TMEM56-202ENST00000455656 ORC4O43929 436 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 NDUFB10O96000 172 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 INHAP05111 366 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 CCL5P13501 91 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 TFAP4Q01664 338 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 ATP2B2Q01814 1243 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 TRIM32Q13049 653 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 TRIB2Q92519 343 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 ZNF287Q9HBT7 754 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 IL17RBQ9NRM6 502 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 CLIP2Q9UDT6 1046 aa14.09□□□□□ -0.15
TMEM56-202ENST00000455656 PLXNA1Q9UIW2 1896 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 F5H6K3 240 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 FLOT1O75955 427 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 KLRC3Q07444 240 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
TMEM56-202ENST00000455656 PLEKHH3Q7Z736 793 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 SOCS4Q8WXH5 440 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 NUP88Q99567 741 aaPredicted RBP14.08□□□□□ -0.16
TMEM56-202ENST00000455656 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
TMEM56-202ENST00000455656 GOPCQ9HD26 462 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms