RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 DEFB123Q8N688 67 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 MB21D1Q8N884 522 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 MIGA1Q8NAN2 632 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 LPAR1Q92633 364 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 EAF2Q96CJ1 260 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 LBHD1Q9BQE6 289 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 CCDC8Q9H0W5 538 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 PRKAG2Q9UGJ0 569 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 STXBP5LQ9Y2K9 1186 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 PFASO15067 1338 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 ZNF236Q9UL36 1845 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 DNM1LO00429 736 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 MS4A1P11836 297 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 GRB14Q14449 540 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 CCL14Q16627 93 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 AACSQ86V21 672 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 ZNF579Q8NAF0 562 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 ARRDC4Q8NCT1 418 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 SH2D4AQ9H788 454 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 TLR7Q9NYK1 1049 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 DDX20Q9UHI6 824 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 TNNQ9UQP3 1299 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 SZT2Q5T011 3432 aa9.72□□□□□ -0.85
NIF3L1-209ENST00000454952 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 PEX10O60683 326 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 CNMDO75829 334 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 CNGA1P29973 690 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 SHMT1P34896 483 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 PDAP1Q13442 181 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 COG2Q14746 738 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 LRRC26Q2I0M4 334 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 SHROOM1Q2M3G4 852 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 CEP85Q6P2H3 762 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 DPP9Q86TI2 863 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 AMOTL1Q8IY63 956 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 CLASRPQ8N2M8 674 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 RPAP3Q9H6T3 665 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 MCM9Q9NXL9 1143 aa9.71□□□□□ -0.86
NIF3L1-209ENST00000454952 MPHOSPH10O00566 681 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 HMMRO75330 724 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 GABPAQ06546 454 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 SLC9C2Q5TAH2 1124 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 FAM109BQ6ICB4 259 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 TMEM179Q6ZVK1 233 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 ABRAQ8N0Z2 381 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 ACER1Q8TDN7 264 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 KIF1BPQ96EK5 621 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 RIOK1Q9BRS2 568 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 TANGO6Q9C0B7 1094 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 SENP6Q9GZR1 1112 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 MROH8Q9H579 483 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
NIF3L1-209ENST00000454952 KBTBD13C9JR72 458 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 PDE6AP16499 860 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 PLCD1P51178 756 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 CLCN6P51797 869 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 SEPT2Q15019 361 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 KIF12Q96FN5 646 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 CCDC17Q96LX7 622 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 SPATC1LQ9H0A9 340 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 MTMR10Q9NXD2 777 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 FLRT1Q9NZU1 646 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 NRBP1Q9UHY1 535 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 EXOC6BQ9Y2D4 811 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
NIF3L1-209ENST00000454952 RLFQ13129 1914 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 ZNFX1Q9P2E3 1918 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 A0A0G2JMZ2 1700 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 SEPT4O43236 478 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 SLC25A27O95847 323 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 CYBAP13498 195 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 ADORA2AP29274 412 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 CYP2C19P33261 490 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 COPB2P35606 906 aa9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 HNRNPUQ00839 825 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 RPAP2Q8IXW5 612 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 MOV10L1Q9BXT6 1211 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-209ENST00000454952 MYH7P12883 1935 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms