RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 RNPC3Q96LT9 517 aaKnown RBP12.09□□□□□ -0.47
CLCN4-204ENST00000454850 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
CLCN4-204ENST00000454850 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
CLCN4-204ENST00000454850 GBF1Q92538 1859 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 SEPT4O43236 478 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-204ENST00000454850 PLS1Q14651 629 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 SEPT2Q15019 361 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 LRRC41Q15345 812 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
CLCN4-204ENST00000454850 MCM3APO60318 1980 aa12.08□□□□□ -0.48
CLCN4-204ENST00000454850 REV3LO60673 3130 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
CLCN4-204ENST00000454850 COBLO75128 1261 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 ERCC3P19447 782 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 SHMT1P34896 483 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
CLCN4-204ENST00000454850 EPHB4P54760 987 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 TLE2Q04725 743 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 SNX17Q15036 470 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 TTC6Q86TZ1 520 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 NCAPG2Q86XI2 1143 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
CLCN4-204ENST00000454850 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 USP38Q8NB14 1042 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
CLCN4-204ENST00000454850 SPATC1LQ9H0A9 340 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 EHD4Q9H223 541 aa12.07□□□□□ -0.48
CLCN4-204ENST00000454850 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
CLCN4-204ENST00000454850 STRNO43815 780 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
CLCN4-204ENST00000454850 IGHA2P01877 340 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 CLTBP09497 229 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 ITGB8P26012 769 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 PLCD1P51178 756 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 COG2Q14746 738 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
CLCN4-204ENST00000454850 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 CCDC8Q9H0W5 538 aaPredicted RBP12.06□□□□□ -0.48
CLCN4-204ENST00000454850 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 SLC5A4Q9NY91 659 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 CHD7Q9P2D1 2997 aa12.06□□□□□ -0.48
CLCN4-204ENST00000454850 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
CLCN4-204ENST00000454850 A0A1W2PRG0 241 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-204ENST00000454850 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
CLCN4-204ENST00000454850 TRIM27P14373 513 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 RAG1P15918 1043 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 COL9A1P20849 921 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 DNAJB2P25686 324 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 EVX2Q03828 476 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 FPGSQ05932 587 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 GRIN2CQ14957 1233 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 PPM1EQ8WY54 764 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 RAPGEFL1Q9UHV5 662 aa12.05□□□□□ -0.48
CLCN4-204ENST00000454850 DBNLQ9UJU6 430 aaKnown RBP12.05□□□□□ -0.48
CLCN4-204ENST00000454850 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 TNFRSF10AO00220 468 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 SURF6O75683 361 aaKnown RBP12.04□□□□□ -0.48
CLCN4-204ENST00000454850 BCAR3O75815 825 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 FLOT1O75955 427 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 PGK1P00558 417 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 RARBP10826 455 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 CLEC10AQ8IUN9 316 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 SHCBP1Q8NEM2 672 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 LENG1Q96BZ8 264 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-204ENST00000454850 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
CLCN4-204ENST00000454850 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 PHF24Q9UPV7 400 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
CLCN4-204ENST00000454850 A0A1W2PQ45 241 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-204ENST00000454850 A0A1W2PQY0 241 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 FCER1AP12319 257 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 POLA2Q14181 598 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 RNF180Q86T96 592 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 MB21D1Q8N884 522 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 MROH8Q9H579 483 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
CLCN4-204ENST00000454850 MYH7P12883 1935 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
CLCN4-204ENST00000454850 PGK2P07205 417 aa12.02□□□□□ -0.49
CLCN4-204ENST00000454850 TAL1P17542 331 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-204ENST00000454850 DSG3P32926 999 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms