RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LAPTM4AQ15012 233 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 BBS9Q3SYG4 887 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 HSP90AB2PQ58FF8 381 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CNNM4Q6P4Q7 775 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 PHACTR4Q8IZ21 702 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 ZNF507Q8TCN5 953 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC74BQ96LY2 380 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CDC6Q99741 560 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 MTFR1LQ9H019 292 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CST3P01034 146 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 HOXB4P17483 251 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CAP2P40123 477 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PCBP1Q15365 356 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 SF1Q15637 639 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 ANKRD39Q53RE8 183 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PRAMEF13Q5VWM6 474 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 HEATR6Q6AI08 1181 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CHSY3Q70JA7 882 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 FGD2Q7Z6J4 655 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 SCLYQ96I15 445 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 COL25A1Q9BXS0 654 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 GSX1Q9H4S2 264 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 NSFL1CQ9UNZ2 370 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 BLACEA4D250 179 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 MEGF11A6BM72 1044 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 SHISA8B8ZZ34 492 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 AGRPO00253 132 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 DLX3O60479 287 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 ALDH1L1O75891 902 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 POU3F2P20265 443 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 PMLP29590 882 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 GBP1P32455 592 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 CYP4F3Q08477 520 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 LRRC41Q15345 812 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NTRK3Q16288 839 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NBPF12Q5TAG4 269 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 GSTCDQ8NEC7 633 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 CYB5D2Q8WUJ1 264 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 EDARADDQ8WWZ3 215 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 ISL2Q96A47 359 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 SLC52A2Q9HAB3 445 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 MAGEC2Q9UBF1 373 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 KRBA1A5PL33 1030 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ALG1L2C9J202 215 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 H3BM21 787 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 KATNA1O75449 491 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CLEC3AO75596 197 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 VSIG8P0DPA2 414 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 DRD2P14416 443 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CD247P20963 164 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TBX4P57082 545 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 SUMO1P63165 101 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ZNF460Q14592 562 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TTF1Q15361 905 aaPredicted RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 MAP4K3Q8IVH8 894 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ARHGEF39Q8N4T4 335 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 GALNT6Q8NCL4 622 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 BVESQ8NE79 360 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 DNAJB8Q8NHS0 232 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ASPSCR1Q9BZE9 553 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM8Q9BZR9 551 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 NXF1Q9UBU9 619 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 EMC9Q9Y3B6 208 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 LOC102724159A0A0B4J2E5 919 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ADH5P11766 374 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 SRSF11Q05519 484 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 MCL1Q07820 350 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 PWP2Q15269 919 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 DDX46Q7L014 1031 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC144CPQ8IYA2 1237 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ATL2Q8NHH9 583 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 RIN3Q8TB24 985 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 LEO1Q8WVC0 666 aaPredicted RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BTN2A2Q8WVV5 523 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BRF1Q92994 677 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 RCC1LQ96I51 464 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 C8orf48Q96LL4 319 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 GP6Q9HCN6 339 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 MCM8Q9UJA3 840 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms