RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 TRIM27P14373 513 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 ITGB8P26012 769 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 POLA2Q14181 598 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 LRRC41Q15345 812 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 PRAMEF19Q5SWL8 479 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 TLR7Q9NYK1 1049 aaKnown RBP26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 SMCHD1A6NHR9 2005 aa26.54■■□□□ 1.84
TNFRSF25-208ENST00000453341 ZNF316A6NFI3 1004 aaPredicted RBP26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 ERCC3P19447 782 aa26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 PLCD1P51178 756 aa26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 C1orf53Q5VUE5 145 aa26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 SPATC1LQ9H0A9 340 aa26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 CABP5Q9NP86 173 aa26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 DBNLQ9UJU6 430 aaKnown RBP26.53■■□□□ 1.84
TNFRSF25-208ENST00000453341 A0A1W2PRG0 241 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 STRNO43815 780 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 IDH1O75874 414 aaKnown RBP26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 EPHB4P54760 987 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 TLE2Q04725 743 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 SEPT2Q15019 361 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 FAM47AQ5JRC9 791 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 TTC6Q86TZ1 520 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 MAGEB6Q8N7X4 407 aa26.52■■□□□ 1.84
TNFRSF25-208ENST00000453341 COG2Q14746 738 aa26.51■■□□□ 1.83
TNFRSF25-208ENST00000453341 SHCBP1Q8NEM2 672 aa26.51■■□□□ 1.83
TNFRSF25-208ENST00000453341 EVX2Q03828 476 aa26.5■■□□□ 1.83
TNFRSF25-208ENST00000453341 OS9Q13438 667 aaPredicted RBP26.5■■□□□ 1.83
TNFRSF25-208ENST00000453341 KIAA1755Q5JYT7 1200 aa26.5■■□□□ 1.83
TNFRSF25-208ENST00000453341 CERS3Q8IU89 383 aa26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 USP38Q8NB14 1042 aa26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 SYMPKQ92797 1274 aaKnown RBP26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 RNPC3Q96LT9 517 aaKnown RBP26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 HOXC10Q9NYD6 342 aa26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 CHD9Q3L8U1 2897 aa26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 ZNFX1Q9P2E3 1918 aaKnown RBP26.49■■□□□ 1.83
TNFRSF25-208ENST00000453341 TMEM265A0A087WTH1 108 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 GABPAQ06546 454 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 SSH3Q8TE77 659 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 CLUAP1Q96AJ1 413 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 MAML3Q96JK9 1138 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 TANGO6Q9C0B7 1094 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 CCDC8Q9H0W5 538 aaPredicted RBP26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 ANTXR1Q9H6X2 564 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 PHF24Q9UPV7 400 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 NAV1Q8NEY1 1877 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 NCOR1O75376 2440 aa26.48■■□□□ 1.83
TNFRSF25-208ENST00000453341 RIOK1Q9BRS2 568 aaKnown RBP26.47■■□□□ 1.83
TNFRSF25-208ENST00000453341 SURF6O75683 361 aaKnown RBP26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 CLTBP09497 229 aa26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 GRIN2CQ14957 1233 aa26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 SLC5A4Q9NY91 659 aa26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 TACC3Q9Y6A5 838 aa26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 BDP1A6H8Y1 2624 aa26.46■■□□□ 1.83
TNFRSF25-208ENST00000453341 PARP14Q460N5 1801 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 BCAR3O75815 825 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 DSG3P32926 999 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 PLS1Q14651 629 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 NCAPG2Q86XI2 1143 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 ABRAQ8N0Z2 381 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 EAF2Q96CJ1 260 aaPredicted RBP26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 MROH8Q9H579 483 aa26.45■■□□□ 1.82
TNFRSF25-208ENST00000453341 MPHOSPH10O00566 681 aaKnown RBP26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 KIAA0355O15063 1070 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 IPO8O15397 1037 aaKnown RBP26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 ATP8B2P98198 1209 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 MB21D1Q8N884 522 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 FRAT1Q92837 279 aaPredicted RBP26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 ATG4CQ96DT6 458 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 XPNPEP3Q9NQH7 507 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 MYO9BQ13459 2157 aa26.44■■□□□ 1.82
TNFRSF25-208ENST00000453341 POLR3DP05423 398 aaPredicted RBP26.43■■□□□ 1.82
TNFRSF25-208ENST00000453341 TJAP1Q5JTD0 557 aa26.43■■□□□ 1.82
TNFRSF25-208ENST00000453341 PQBP1O60828 265 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 PGK1P00558 417 aa26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 DNAJB2P25686 324 aa26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 TMEM57Q8N5G2 664 aa26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 C1orf115Q9H7X2 142 aa26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 NOP58Q9Y2X3 529 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 COL11A1P12107 1806 aaPredicted RBP26.42■■□□□ 1.82
TNFRSF25-208ENST00000453341 A0A1W2PQ45 241 aaPredicted RBP26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 A0A1W2PQY0 241 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 FLOT1O75955 427 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 RARBP10826 455 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 RAG1P15918 1043 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 TAL1P17542 331 aaPredicted RBP26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 FPGSQ05932 587 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 MAP3K12Q12852 859 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 CLEC10AQ8IUN9 316 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 SIAH1Q8IUQ4 282 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 SLC44A5Q8NCS7 719 aa26.41■■□□□ 1.82
TNFRSF25-208ENST00000453341 PLXNA1Q9UIW2 1896 aa26.4■■□□□ 1.82
TNFRSF25-208ENST00000453341 FCER1AP12319 257 aa26.4■■□□□ 1.82
TNFRSF25-208ENST00000453341 SPICE1Q8N0Z3 855 aa26.4■■□□□ 1.82
TNFRSF25-208ENST00000453341 LENG1Q96BZ8 264 aaPredicted RBP26.4■■□□□ 1.82
TNFRSF25-208ENST00000453341 NRBP1Q9UHY1 535 aa26.4■■□□□ 1.82
TNFRSF25-208ENST00000453341 ROBO3Q96MS0 1386 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 MAGEB6P1A0A0J9YX57 407 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 PGK2P07205 417 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 CYP2D6P10635 497 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 COL9A1P20849 921 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms