RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 MYRIPQ8NFW9 859 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
COL27A1-202ENST00000451716 XDHP47989 1333 aa13.81□□□□□ -0.2
COL27A1-202ENST00000451716 DDAH1O94760 285 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 PCP11498 1178 aaKnown RBP13.8□□□□□ -0.2
COL27A1-202ENST00000451716 GYS1P13807 737 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
COL27A1-202ENST00000451716 IL17RBQ9NRM6 502 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 SRPRBQ9Y5M8 271 aaKnown RBP13.8□□□□□ -0.2
COL27A1-202ENST00000451716 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 CALM1P0DP23 149 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 CALM2P0DP24 149 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 CALM3P0DP25 149 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 PLCD1P51178 756 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 SPATA31A6Q5VVP1 1343 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 WDR66Q8TBY9 1149 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 DPF2Q92785 391 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
COL27A1-202ENST00000451716 A0A087X0B3 334 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 CASP1P29466 404 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 FANCCQ00597 558 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 POSTNQ15063 836 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 TPD52L1Q16890 204 aaPredicted RBP13.79□□□□□ -0.2
COL27A1-202ENST00000451716 SBK1Q52WX2 424 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 C12orf60Q5U649 245 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 TRMT1Q9NXH9 659 aaKnown RBP13.79□□□□□ -0.2
COL27A1-202ENST00000451716 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
COL27A1-202ENST00000451716 SMTNL1A8MU46 457 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 SERPINB2P05120 415 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 CCZ1BP86790 482 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 CCZ1P86791 482 aaPredicted RBP13.79□□□□□ -0.2
COL27A1-202ENST00000451716 RASGRP2Q7LDG7 609 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
COL27A1-202ENST00000451716 DHX58Q96C10 678 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 FANCLQ9NW38 375 aa13.79□□□□□ -0.2
COL27A1-202ENST00000451716 NLRP5P59047 1200 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 PIK3AP1Q6ZUJ8 805 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 MAN1B1Q9UKM7 699 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 CEP131Q9UPN4 1083 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
COL27A1-202ENST00000451716 CLSTN1O94985 981 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 TPM4P67936 248 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 MYL5Q02045 173 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 OLFM4Q6UX06 510 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
COL27A1-202ENST00000451716 SCG2P13521 617 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 TNNT1P13805 278 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 AFMP43652 599 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.2
COL27A1-202ENST00000451716 PNMA1Q8ND90 353 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 CD209Q9NNX6 404 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 CCDC88AQ3V6T2 1871 aa13.77□□□□□ -0.2
COL27A1-202ENST00000451716 IKBKBO14920 756 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.21
COL27A1-202ENST00000451716 TRIM37O94972 964 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 SERPINC1P01008 464 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 HSPA1LP34931 641 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 ARMCX5Q6P1M9 558 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 STAMQ92783 540 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 SYMPKQ92797 1274 aaKnown RBP13.77□□□□□ -0.21
COL27A1-202ENST00000451716 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL27A1-202ENST00000451716 PTGDRQ13258 359 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 BRMS1Q9HCU9 246 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 POLLQ9UGP5 575 aa13.77□□□□□ -0.21
COL27A1-202ENST00000451716 LY75O60449 1722 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 BAG3O95817 575 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 MCM7P33993 719 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 BTDP43251 543 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 UBASH3AP57075 661 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 GOLGA8FQ08AF8 430 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 GOLGA8DPQ0D2H9 430 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
COL27A1-202ENST00000451716 SMARCE1Q969G3 411 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 GGA1Q9UJY5 639 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 ST5P78524 1137 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 DDR1Q08345 913 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-202ENST00000451716 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
COL27A1-202ENST00000451716 RTFDC1Q9BY42 306 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-202ENST00000451716 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
COL27A1-202ENST00000451716 KIAA1551Q9HCM1 1747 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
COL27A1-202ENST00000451716 CAPN2P17655 700 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms