RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SOCS4Q8WXH5 440 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
LINC01004-202ENST00000450686 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
LINC01004-202ENST00000450686 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
LINC01004-202ENST00000450686 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 MYH8P13535 1937 aa12.36□□□□□ -0.43
LINC01004-202ENST00000450686 A0A1W2PRG0 241 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
LINC01004-202ENST00000450686 PDE6AP16499 860 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 RGS2P41220 211 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 NPLOC4Q8TAT6 608 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 DYNLL2Q96FJ2 89 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 APBA2Q99767 749 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
LINC01004-202ENST00000450686 RLFQ13129 1914 aa12.35□□□□□ -0.43
LINC01004-202ENST00000450686 EYSQ5T1H1 3165 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 CYP2D7A0A087X1C5 515 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
LINC01004-202ENST00000450686 GOLIM4O00461 696 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 POLR3DP05423 398 aaPredicted RBP12.34□□□□□ -0.43
LINC01004-202ENST00000450686 XRCC5P13010 732 aaKnown RBP12.34□□□□□ -0.43
LINC01004-202ENST00000450686 CYP2C19P33261 490 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
LINC01004-202ENST00000450686 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 TRPV1Q8NER1 839 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 C12orf42Q96LP6 360 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
LINC01004-202ENST00000450686 PRKAB2O43741 272 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 COL6A1P12109 1028 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 CNGA1P29973 690 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 RHPN1Q8TCX5 695 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 EHD4Q9H223 541 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 MCM9Q9NXL9 1143 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
LINC01004-202ENST00000450686 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
LINC01004-202ENST00000450686 A0A0G2JMZ2 1700 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 AKR1B1P15121 316 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 PTPREP23469 700 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
LINC01004-202ENST00000450686 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
LINC01004-202ENST00000450686 A0A1W2PPC1 479 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 USP14P54578 494 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 GABPAQ06546 454 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 DEFB123Q8N688 67 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 MOV10L1Q9BXT6 1211 aaKnown RBP12.31□□□□□ -0.44
LINC01004-202ENST00000450686 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
LINC01004-202ENST00000450686 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
LINC01004-202ENST00000450686 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
LINC01004-202ENST00000450686 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 MYH7P12883 1935 aa12.31□□□□□ -0.44
LINC01004-202ENST00000450686 SLC15A5A6NIM6 579 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 MBD4O95243 580 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 BMP8BP34820 402 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 CCNA1P78396 465 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 GRB14Q14449 540 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 GJC2Q5T442 439 aaPredicted RBP12.3□□□□□ -0.44
LINC01004-202ENST00000450686 MFSD14CQ5VZR4 134 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
LINC01004-202ENST00000450686 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
LINC01004-202ENST00000450686 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 DDX20Q9UHI6 824 aaKnown RBP12.3□□□□□ -0.44
LINC01004-202ENST00000450686 ZNFX1Q9P2E3 1918 aaKnown RBP12.3□□□□□ -0.44
LINC01004-202ENST00000450686 PRUNE2Q8WUY3 3088 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 LTBP2Q14767 1821 aa12.3□□□□□ -0.44
LINC01004-202ENST00000450686 CDH23Q9H251 3354 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
LINC01004-202ENST00000450686 COBLO75128 1261 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 ADORA2AP29274 412 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms