RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 N4BP3O15049 544 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 TFRCP02786 760 aaKnown RBP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 DPYDQ12882 1025 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 CUL4BQ13620 913 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 SPATA20Q8TB22 786 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 PANX2Q96RD6 677 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 ADD3Q9UEY8 706 aaKnown RBP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 SLIT2O94813 1529 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
SYVN1-204ENST00000449943 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
SYVN1-204ENST00000449943 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 USP17L21D6R901 530 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 MFAP3LO75121 409 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 APTXQ7Z2E3 356 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 AK7Q96M32 723 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 CTCFLQ8NI51 663 aaPredicted RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 GYS2P54840 703 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 CTAGE1Q96RT6 745 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 RSRC2Q7L4I2 434 aaKnown RBP12.81□□□□□ -0.36
SYVN1-204ENST00000449943 MYH3P11055 1940 aa12.81□□□□□ -0.36
SYVN1-204ENST00000449943 GYPCP04921 128 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RABGGTAQ92696 567 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-204ENST00000449943 FUT2Q10981 343 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 KRT31Q15323 416 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 SRBD1Q8N5C6 995 aaKnown RBP12.8□□□□□ -0.36
SYVN1-204ENST00000449943 ANKRD20A12PQ8NF67 263 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
SYVN1-204ENST00000449943 CTDP1Q9Y5B0 961 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-204ENST00000449943 XDHP47989 1333 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 ADAMTS3O15072 1205 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 ABL1P00519 1130 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RCAN1P53805 252 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 CDKAL1Q5VV42 579 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 SLC35F6Q8N357 371 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RHOXF2BP0C7M4 288 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 TXLNAP40222 546 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 TROAPQ12815 778 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 CNGA4Q8IV77 575 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 ANKRD18AQ8IVF6 992 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 IQUBQ8NA54 791 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 PLIN2Q99541 437 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 RHOXF2Q9BQY4 288 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
SYVN1-204ENST00000449943 NTSR2O95665 410 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 CYP2D6P10635 497 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 RFC4P35249 363 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 ST5P78524 1137 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 MCM6Q14566 821 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
SYVN1-204ENST00000449943 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 RASGRP4Q8TDF6 673 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 NELFBQ8WX92 580 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 CHD4Q14839 1912 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 BMP15O95972 392 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 CYP2C19P33261 490 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 LONRF2Q1L5Z9 754 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 PARP10Q53GL7 1025 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 SRGAP1Q7Z6B7 1085 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
SYVN1-204ENST00000449943 NUP98P52948 1817 aa12.79□□□□□ -0.36
SYVN1-204ENST00000449943 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 CLSTN1O94985 981 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 PAK1Q13153 545 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
SYVN1-204ENST00000449943 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
SYVN1-204ENST00000449943 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.369e-6■■□□□ 14.5
SYVN1-204ENST00000449943 ANAPC4Q9UJX5 808 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 BAZ2BQ9UIF8 2168 aaKnown RBP12.78□□□□□ -0.36
SYVN1-204ENST00000449943 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
SYVN1-204ENST00000449943 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
SYVN1-204ENST00000449943 CALM1P0DP23 149 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms